Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_3372 |
Symbol | |
ID | 8727125 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 4073216 |
End bp | 4074583 |
Gene Length | 1368 bp |
Protein Length | 455 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003388179 |
Protein GI | 284038249 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.315393 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAACAC CACTACAGGT ACTTACAGGA TTGGGCGTTC TGTTGCTGCT GGTACAATGC CAGAAACTGA AACCCGAAGC GCCGAAAGCC GAGGGCTTCG ACCCGCCTAT TCAACCCACC ATGTCTTATC TGGCAGGACC TATTACATTT CAGCTTTCGG AACTGAAAGA GAAAATCAAT GCCGAACTCG ATCCGGTGCT TATTGGCAAA CAGACAAAAG ATGGAAAAAC GAAAGGTATC ATCTCCTTTC GGGTCAAACG CCTGGGACCA GTGAATGTCG AGTACGTTGA TCAGCAGATA AAGCTGTCGG CTCCCCTGCA AATGTGGCTG ACTAAACCGT TCAGCCGGGA CACGACCCCG CCTAAAGAAC CTTTCTGTGC GCTGAACGTC AATTTCAAAA CCCCCATCAG CGTGACACCT AACTGGCGGC TGGGTAGCCG AACGACCTTC ACCGATTACA CCTGGATTGT CCAGCCCAAA ATTGCGGGAA TTTCCCTGAC AAACATCGTT CAAAACATAC TGGACCGACA CAAGACGGAT ATCGAAATGG CCATTGACTC GGCCGTGCAT ACGCAATTGC GGCTCGATGA AATGGTAAAA CCCATCTGGC ACGACATTCA GAACCCACTT CTGATCAGTA AAGAGTACGG GCTCTGGCTG ATACCGAAAC CCGTTAGTGT GGCTGCCGGT CCGGTTACGG GCGATGCCCG TCAGCTAACA ACCCACATTC GAATTGCGCT TCAAACGCAA ACCGAGCTAA AACCCAAAGA ACCTGAACAT CCGCGTACGC CCTTGCCTAT ATTACAAAAA CGGGAGCAAG TCTCGGAAGT ATCTGATTTG AACGTGCTGA GCTTTATTCC TTATGCCGAC ATTAACCGGA TGCTCGCCAT CACGACCAAT AACAAGAGTA AAAAACTGGC CCTGGGCTCG CTGACAATTA AGGAGGTAAG TGTCTATGGC GGACAGCGGT CATTGATCAT CAAAGCCGAT GTTAGCGGAC TTATGGACGG AACGATGTAT CTGCGCGGTC GGCCGGTATT TGATACGCTG ACGAATACCC TCCGTGTCAC GAATCTGGAT TTTGATGCAG AAACCTGGAG TGCCCTGTCC AGCAGTTCAA ATACGGTCTG GCACAAAGGA CTGCGTAAAC TGCTCGAAAA TCTGCTGACC ATTCGACTCG GCGACGACAT TGCTAAATTG CCCCAGACCA TTGACAAGGC TTTCGAAAAA GGTGGCCCCG GTAAAAAAAC AGACCTGGGT ATTCAGTCGT TTCGGTTTGT ACCGCAGACG ATTGCGATCC GGCCCGATGG TATTCAGGCA TTGATTAAAG TGAAGTCGAC GGTTAAGGTT ACCGTAAATC AGTTGTGA
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Protein sequence | MKTPLQVLTG LGVLLLLVQC QKLKPEAPKA EGFDPPIQPT MSYLAGPITF QLSELKEKIN AELDPVLIGK QTKDGKTKGI ISFRVKRLGP VNVEYVDQQI KLSAPLQMWL TKPFSRDTTP PKEPFCALNV NFKTPISVTP NWRLGSRTTF TDYTWIVQPK IAGISLTNIV QNILDRHKTD IEMAIDSAVH TQLRLDEMVK PIWHDIQNPL LISKEYGLWL IPKPVSVAAG PVTGDARQLT THIRIALQTQ TELKPKEPEH PRTPLPILQK REQVSEVSDL NVLSFIPYAD INRMLAITTN NKSKKLALGS LTIKEVSVYG GQRSLIIKAD VSGLMDGTMY LRGRPVFDTL TNTLRVTNLD FDAETWSALS SSSNTVWHKG LRKLLENLLT IRLGDDIAKL PQTIDKAFEK GGPGKKTDLG IQSFRFVPQT IAIRPDGIQA LIKVKSTVKV TVNQL
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