Gene Slin_3372 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_3372 
Symbol 
ID8727125 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp4073216 
End bp4074583 
Gene Length1368 bp 
Protein Length455 aa 
Translation table11 
GC content50% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003388179 
Protein GI284038249 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.315393 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACAC CACTACAGGT ACTTACAGGA TTGGGCGTTC TGTTGCTGCT GGTACAATGC 
CAGAAACTGA AACCCGAAGC GCCGAAAGCC GAGGGCTTCG ACCCGCCTAT TCAACCCACC
ATGTCTTATC TGGCAGGACC TATTACATTT CAGCTTTCGG AACTGAAAGA GAAAATCAAT
GCCGAACTCG ATCCGGTGCT TATTGGCAAA CAGACAAAAG ATGGAAAAAC GAAAGGTATC
ATCTCCTTTC GGGTCAAACG CCTGGGACCA GTGAATGTCG AGTACGTTGA TCAGCAGATA
AAGCTGTCGG CTCCCCTGCA AATGTGGCTG ACTAAACCGT TCAGCCGGGA CACGACCCCG
CCTAAAGAAC CTTTCTGTGC GCTGAACGTC AATTTCAAAA CCCCCATCAG CGTGACACCT
AACTGGCGGC TGGGTAGCCG AACGACCTTC ACCGATTACA CCTGGATTGT CCAGCCCAAA
ATTGCGGGAA TTTCCCTGAC AAACATCGTT CAAAACATAC TGGACCGACA CAAGACGGAT
ATCGAAATGG CCATTGACTC GGCCGTGCAT ACGCAATTGC GGCTCGATGA AATGGTAAAA
CCCATCTGGC ACGACATTCA GAACCCACTT CTGATCAGTA AAGAGTACGG GCTCTGGCTG
ATACCGAAAC CCGTTAGTGT GGCTGCCGGT CCGGTTACGG GCGATGCCCG TCAGCTAACA
ACCCACATTC GAATTGCGCT TCAAACGCAA ACCGAGCTAA AACCCAAAGA ACCTGAACAT
CCGCGTACGC CCTTGCCTAT ATTACAAAAA CGGGAGCAAG TCTCGGAAGT ATCTGATTTG
AACGTGCTGA GCTTTATTCC TTATGCCGAC ATTAACCGGA TGCTCGCCAT CACGACCAAT
AACAAGAGTA AAAAACTGGC CCTGGGCTCG CTGACAATTA AGGAGGTAAG TGTCTATGGC
GGACAGCGGT CATTGATCAT CAAAGCCGAT GTTAGCGGAC TTATGGACGG AACGATGTAT
CTGCGCGGTC GGCCGGTATT TGATACGCTG ACGAATACCC TCCGTGTCAC GAATCTGGAT
TTTGATGCAG AAACCTGGAG TGCCCTGTCC AGCAGTTCAA ATACGGTCTG GCACAAAGGA
CTGCGTAAAC TGCTCGAAAA TCTGCTGACC ATTCGACTCG GCGACGACAT TGCTAAATTG
CCCCAGACCA TTGACAAGGC TTTCGAAAAA GGTGGCCCCG GTAAAAAAAC AGACCTGGGT
ATTCAGTCGT TTCGGTTTGT ACCGCAGACG ATTGCGATCC GGCCCGATGG TATTCAGGCA
TTGATTAAAG TGAAGTCGAC GGTTAAGGTT ACCGTAAATC AGTTGTGA
 
Protein sequence
MKTPLQVLTG LGVLLLLVQC QKLKPEAPKA EGFDPPIQPT MSYLAGPITF QLSELKEKIN 
AELDPVLIGK QTKDGKTKGI ISFRVKRLGP VNVEYVDQQI KLSAPLQMWL TKPFSRDTTP
PKEPFCALNV NFKTPISVTP NWRLGSRTTF TDYTWIVQPK IAGISLTNIV QNILDRHKTD
IEMAIDSAVH TQLRLDEMVK PIWHDIQNPL LISKEYGLWL IPKPVSVAAG PVTGDARQLT
THIRIALQTQ TELKPKEPEH PRTPLPILQK REQVSEVSDL NVLSFIPYAD INRMLAITTN
NKSKKLALGS LTIKEVSVYG GQRSLIIKAD VSGLMDGTMY LRGRPVFDTL TNTLRVTNLD
FDAETWSALS SSSNTVWHKG LRKLLENLLT IRLGDDIAKL PQTIDKAFEK GGPGKKTDLG
IQSFRFVPQT IAIRPDGIQA LIKVKSTVKV TVNQL