Gene Slin_3364 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_3364 
Symbol 
ID8727117 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp4068013 
End bp4068738 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content52% 
IMG OID 
ProductCurlin associated repeat protein 
Protein accessionYP_003388172 
Protein GI284038242 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.730228 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.191795 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCAT TTATCTTAAG CCTGTCAACC TGCGTTAGTC TCGCAACGAC CGCATTTGCC 
CAAAATAACA CCGTTACCCT GACTCAGATA GGAACGGCGC AAGAAGCGTC GGTTAGCCAG
GCTGGCAGCA AATTGACGGC TACAGTTACC CAGGAGGGTG CTGACCAAAA CGCCATCATC
AGCCAGAAAG GATTTGGCTA TTCGGAAGTC ATCATTAGCC AGGGGCAAAA TACAGCCGAC
AATCAGGCCA CTATCACGCA GGTGTCTGGC GGTGCGGGAG GTAGCTATGG CGTTATCAGC
CAGGTAAATG CTTCGGGCAA TAAGGCCACT ATCACACAGA CGGTGAGCAC AAACGGCGGA
GATAACTTTG CTACCATCAC GCAGGGTTCT TCGATAGGCG TTGTTCTTGC CGGAGCGGCT
GGTGCCACGA GTACCAACAA TCAGGCAACC ATTACTATAG AAGGGTCTAA CAACCGAAGC
CGGATTCTAC AGGTTGGCGA CAACAACAGC CTGACGACGA GCCAGTATGG TGAGGGGAAT
TTAGTGAAAG GTGTACTCGG TAATCCGGCG GGGACCAACC CCGAAGAGGC TACGCAACTG
GGTGTAGGAA ACAGTCTGTC AGTCGTCCAA TCGTCTCCTT TGGGGGTCTC CTTTGGTACA
AATACGGTAA ATGTCTACCA GAGCGGCATG AGTAACGTAG GGACCGTTAA CCAGACGAAT
CAATAA
 
Protein sequence
MKAFILSLST CVSLATTAFA QNNTVTLTQI GTAQEASVSQ AGSKLTATVT QEGADQNAII 
SQKGFGYSEV IISQGQNTAD NQATITQVSG GAGGSYGVIS QVNASGNKAT ITQTVSTNGG
DNFATITQGS SIGVVLAGAA GATSTNNQAT ITIEGSNNRS RILQVGDNNS LTTSQYGEGN
LVKGVLGNPA GTNPEEATQL GVGNSLSVVQ SSPLGVSFGT NTVNVYQSGM SNVGTVNQTN
Q