| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_3279 |
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| Symbol | |
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| ID | 8727032 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | + |
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| Start bp | 3961281 |
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| End bp | 3962657 |
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| Gene Length | 1377 bp |
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| Protein Length | 458 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | |
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| Product | tRNA modification GTPase TrmE |
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| Protein accession | YP_003388089 |
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| Protein GI | 284038159 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.768989 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTATCAAT TAGAACCTAT TGCGGCCCTT GCTACAGCCC CTGGCATCGG TGCCATTGCC
GTGGTCCGCG TATCGGGCGA AGGCGCTATC GAACTAACCA ACCGGCTGTT CCGGGGGAAA
GACCTGACAC AGCAAACGAG CCATACTGCC CATTTCGGCA CCCTTCGGAA CGAAGATGGC
AGCATCATTG ATGAAGTACT GGCCACCGTT TTTCGGGCAC CGAAATCTTT CACGAAAGAA
GATGTTGTTG AGATTTCGTG CCACGGCTCG GAGTTCATTA TCCAGCAGAT TCTGCGTCGG
CTCATGCAGG AAGGCGTCCG ATTGGCCAGG CCGGGTGAGT TCACCCAACG GGCGTTTCTG
AACGGCCAGT TCGACCTTGT ACAAGCCGAA GCCGTGGCCG ACCTGATTGC GTCGGATTCG
GACGCCAGCC ACCGGGCCGC TCTCACCCAG TTGCGGGGTG GTTTCTCGAA ACAGCTCAAG
GAACTCCGCC AGCAACTCAT TGACTTTGTC GCACTGGTCG AGCTGGAACT GGATTTTGGT
GAAGAAGACG TCGAATTCGC CCACCGCGAC CGGCTACGTC AGCTCATGCT CGATATCCGC
CGGGTGCTTC ACCCATTAAT TGAATCGTTC TCAACAGGAA ACGCCATTAA AAACGGTGTA
CCGACGGTTA TTGTCGGCAA GCCCAACGCG GGCAAGTCGA CGTTGCTCAA TGCGCTACTG
AATGAAGAGA AAGCCATCGT TTCCGACATC CCCGGCACCA CCCGCGATGT TATCGAAGAC
GAACTATTCA TTGATGGCAT CCGCTTCCGG CTCATCGACA CGGCCGGGTT ACGGCAGGCT
ACCGACCGCA TCGAAGCTAT CGGCATTGAG CGCACCCAGC AGAAGATGCG GGATGCGTCG
CTGGTTGTTT ATCTGTTCGA TGCGAAGAAT GTGAAAGCTG ACGAACTGCA AACAGCCGTT
GATGAGGTAC GGGCATCGCG TAAGCCGTAT CTGCTTGTTG GTAATAAACT CGATGCCATT
ACCGATACCA CCCGCGAGTC GCTGGAAACG ATGTTAGGTG AATCTGTCGT CTGGATTTCG
GCGGCTAACC AAACGCATCT CGACGAGCTT AAAGCGGCTC TTTCAGCCCG TGTCCGCACC
GATGCCGCCG TGCAAACGGG CAGTGCCGTG GTGACCAACA GCCGCCACTA CAACCACCTC
ACCGGCACCG ACGAAGCCCT CGCTCGCGCC ATTCACGGCC TCGACACCAG CGTCACCCCC
GACTGGCTGG CGATGGACTT ACGGGTAGCC CTGCAACATC TGGGTGAGCT TACCGGAGAG
ATCACAACGG ACGATCTGCT GGATTCAATT TTCAGCAAGT TCTGTATCGG AAAGTAA
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| Protein sequence | MYQLEPIAAL ATAPGIGAIA VVRVSGEGAI ELTNRLFRGK DLTQQTSHTA HFGTLRNEDG
SIIDEVLATV FRAPKSFTKE DVVEISCHGS EFIIQQILRR LMQEGVRLAR PGEFTQRAFL
NGQFDLVQAE AVADLIASDS DASHRAALTQ LRGGFSKQLK ELRQQLIDFV ALVELELDFG
EEDVEFAHRD RLRQLMLDIR RVLHPLIESF STGNAIKNGV PTVIVGKPNA GKSTLLNALL
NEEKAIVSDI PGTTRDVIED ELFIDGIRFR LIDTAGLRQA TDRIEAIGIE RTQQKMRDAS
LVVYLFDAKN VKADELQTAV DEVRASRKPY LLVGNKLDAI TDTTRESLET MLGESVVWIS
AANQTHLDEL KAALSARVRT DAAVQTGSAV VTNSRHYNHL TGTDEALARA IHGLDTSVTP
DWLAMDLRVA LQHLGELTGE ITTDDLLDSI FSKFCIGK
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