Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_3220 |
Symbol | |
ID | 8726973 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 3898239 |
End bp | 3900596 |
Gene Length | 2358 bp |
Protein Length | 785 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | |
Product | glycosyl transferase family 51 |
Protein accession | YP_003388030 |
Protein GI | 284038100 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.259437 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.206704 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTGATC TTGCTCCTGG TCCTTACCGG AAGATAATCC GAAACCTCTG GCGATACTCG CTGCTGGGCA TCGTTATGCT GGTCTTATAT ATTGTTGCTG TCAGCTATAA CTTTCTGTGG CTCTTCGGGG GGATGCCTAG TCTGAAAGCC CTTGAAAATC CTAAAAGTGA AGAGGCCTCC GAAGTATACA CCGCCGACAA TCAATTGCTT GGCAAATACT ACGTCGAAAA TAGAACGCCC ATCGAAATAT CGCAGGTGTC GCCTAATGTA ACCTCAGCCC TTTTGGCTAC GGAAGATGCC CGCTTTGTTA AACACTCGGG CATTGATCCT CGGTCTTTGT TCAGGGCGGT AGGCGGTTTT CTTACGTTCA AGAATGCGTC AAGTTCTGGT GGAGGTAGTA CCCTTACCCA GCAAACAGCG AAAAACCTTT TTGACACCCG CCGGGAAGAA TTACGCGGTG CTTTAGGCCA TATCCCTATT ATCAGCCTGA TCATCGCAAA AACAAAAGAG TGGATTCTGG CTGTTCGCCT GGAGCGAAAT TACACGAAGC AGGAGGTCAT GATGATGTAC CTCAACACCG TTTCATTCGG GAATAACACC TACGGTATCA AAACTGCGGC TAAAACCTAC TTCAGCAAAG AACCCTGGAA TCTGACCGTA GAAGAGGCTG CCCTGCTGGT AGGTATGCTT AAAAACCCAA CGTTCTACAA CCCCCGCTTA TTCGAAGAGC GGACCCGCGA ACGCCGGAAT GTGGTGTTGA GTCAGATGAA AAAATACAAG TTTCTGACCG AAGACCAGTT CATTGCCTAT AAGAACAAGC CCCTGAAACT TGACTTTAGC GTCGAGAATC AGAATACAGG TATGGCCGCT TACTTTAGAT CGGTTATCCG TGATGACATC AAGCGCTGGA TTCGCCAATA TAATGAGGAG AATCCCGGTG CCGAACTGGA CCTGTACACA AGCGGGCTGA AAATCTATAC GACCATCGAC TCCCGCATGC AGGCCTACGC TGAGGAAGCC GTAATGGCGA ACATGCGCGA CCAGCAGAAA AAGTTCTACG AGCACTGGCG CGGTCGGAAC CCTTGGGTAC AGAAAGATCC AAGAACCAAG AAATACGTCG AAATTCCGGG CTTCATTGAA TCCGTAGCCC GACGTACAAC CCGGTATAAA CAACTGAAGG CCGCTTTCGG CGACGACGAG AAAGCTATCT GGGAAGAGAT GCGAAAACCC ATCAAAATGA AGGTTTTTGT CTATGGAAAT CAGCGCAACG ATAAAGATAC GACCATGAGT CCGCTTGATT CGATCCGATA CTACAAGCGG CTGCTCAACA CTGGATTTAT GTCGATGGAC CCTCGCTACG GTTACGTCAA AGCCTGGGTA GGTGGTATCA ATTTTAAATA CATGAAATTT GATCACGTGC GTCAGAGCCG ACGCCAGCCG GGGTCTACCT TCAAACCGTT TGTTTATCTG ACGGCCATGG ACCAGGGATT TGTTACACCC TGTAGCCATA TCGTTGACCA GCCTACGGTA TTTGCCCACG GTGAAGACAA CAACAACGGA CCGCCGTGGA TGCCTAAAAA CTCAACTGGC CGTTATAGCG GCCAGAGTCT GTCGCTACGG GAAGCCCTCG GGCAGTCAAT CAACACCGTA AGTGCTCAAC TGATTAAGAA AACGCGGTCG GCCGCTGTTG TTAAATACGC CCATGACATG GGGATTGAAA GCAAAGACCT GCGGGAAGAC CCTACTCTTT GTTTAGGAAC AAGTGACGTG TCCGTTTATG AGATGGTAGC GGCCTATTGC GCGTTTGCTA ACGGAGGCAC CCGCGTTCGG CCAATGATGC TTATCCGCAT TACCGATAAA AATGGTAATG TGCTGAAAAA TTTCACGCCC GATGCTAAGC AGGTCATCAG CGCCCAACGA GCCTACGAAA TGCTCCATCT GATGCGCGGG GCCGTCGAAG ACCCCAACGG CACGGCCCAA CGGTTACGAA CGCAATACAA GTTGCTGGAC GGTGGCAACG AAATTGCCGC TAAAACAGGA ACGACTTCCA ACTACTCCGA CGCCTGGTTT ATGGGCATGA CCCAGCACCT TGTGTCAGGT CTTTGGGTAG GTGGCGACGA TCGTCCAATC CACTTCAGAA CCATTGAGTT AGGCCAGGGT GGCCGACAGG CTATGCCTGC CTGGGCTATG TATATGCAAA AGATTTACAA AGACCCAACC CTAACCCAAT ACCGCCCTGA ACCCTTCCGG AAACCGAACA ACTTCAAGAT TGATTGTGGT GGTTATCATA TTGATTCTTC TCAGCGATAT ACCCCGCCTA AGGTAGTGCC GGAAGATGAA GATGAAATAC TTCAATAA
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Protein sequence | MFDLAPGPYR KIIRNLWRYS LLGIVMLVLY IVAVSYNFLW LFGGMPSLKA LENPKSEEAS EVYTADNQLL GKYYVENRTP IEISQVSPNV TSALLATEDA RFVKHSGIDP RSLFRAVGGF LTFKNASSSG GGSTLTQQTA KNLFDTRREE LRGALGHIPI ISLIIAKTKE WILAVRLERN YTKQEVMMMY LNTVSFGNNT YGIKTAAKTY FSKEPWNLTV EEAALLVGML KNPTFYNPRL FEERTRERRN VVLSQMKKYK FLTEDQFIAY KNKPLKLDFS VENQNTGMAA YFRSVIRDDI KRWIRQYNEE NPGAELDLYT SGLKIYTTID SRMQAYAEEA VMANMRDQQK KFYEHWRGRN PWVQKDPRTK KYVEIPGFIE SVARRTTRYK QLKAAFGDDE KAIWEEMRKP IKMKVFVYGN QRNDKDTTMS PLDSIRYYKR LLNTGFMSMD PRYGYVKAWV GGINFKYMKF DHVRQSRRQP GSTFKPFVYL TAMDQGFVTP CSHIVDQPTV FAHGEDNNNG PPWMPKNSTG RYSGQSLSLR EALGQSINTV SAQLIKKTRS AAVVKYAHDM GIESKDLRED PTLCLGTSDV SVYEMVAAYC AFANGGTRVR PMMLIRITDK NGNVLKNFTP DAKQVISAQR AYEMLHLMRG AVEDPNGTAQ RLRTQYKLLD GGNEIAAKTG TTSNYSDAWF MGMTQHLVSG LWVGGDDRPI HFRTIELGQG GRQAMPAWAM YMQKIYKDPT LTQYRPEPFR KPNNFKIDCG GYHIDSSQRY TPPKVVPEDE DEILQ
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