Gene Slin_3216 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_3216 
Symbol 
ID8726969 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp3893964 
End bp3895085 
Gene Length1122 bp 
Protein Length373 aa 
Translation table11 
GC content48% 
IMG OID 
ProductATP synthase F0, A subunit 
Protein accessionYP_003388026 
Protein GI284038096 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.100229 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGCGTT CGGCTATTAA TAGGATTTTG TTAGCAACGG CTCTCATTCT GAGTTCGTTA 
GTAGGTGCCC AGGCACAAGA GCATGCCCAC GAGGGTGAAG CGCATGCCAA TCATGAAGGT
GAGGCAAAAG CCGCCAAAGG AAAATTTGAT GTTGGTGGCA TGATTATGCA CCACATTAAA
GATGATCACG GTTGGGAATT TGCCCATGGT GTTACGCTGC CATTACCCGT CATTCTGTAT
TCTAAAGATC GTGGTCTGGA AGTTTTCTCT TCGTCAAACT TAGCCCACGA AGCTACTTAC
AATGGCTATA AGAATGTACA CGGCAAAATT CACCGGGTCA ATGAAGCGGG CGAGGTTGAT
CATGAAGCGA AAGTTTACAA CTTCTCGATC ACCAAGAACG TAGCGTCATT GTTGCTCAGT
GCTGTTATTA TGTTGCTTGT TTTTTCGGCA GTTAGCCGGG GTTACGCAAA AAATAAAGGC
AAGGCTCCCA GCGGGATTCA GTCGTTCCTG GAACCAATTA TTCTGTTCGT TCGGGACGAA
ATTGCCAAGC CAAGCATCGG GCCTAAATAC ACCAAGTACT TGCCTTATCT GCTGACCCTG
TTTTTCTTTA TTCTGGTTAA CAACCTTTTA GGGCTGTTGC CGGGAGCAGC TAACCTGACG
GGTAATATCA CCGTTACACT GGTGCTGGCT GTTATTACCT TTGTGATCGT TACGTTTAGC
GGGAACAAGC ATTACTGGCT GCACATCCTC AAGCCAACGG GTGTTCCAGT TGCGCTGTTG
CCCATCATGA TTCCGGTTGA AATTGTGGGT GTATTCATGA AGCCGCTGTC GCTCATGATT
CGACTATTCG CTAACATCAC CGCTGGTCAC ATCATCATCC TGAGCTTACT CGGCCTCATT
TTTATGGCCA ACAACATGGG TGGTATGGGA ACGAGCGTGG CGATCAGCCC GGTTGTGTTG
TTCTTTACCC TCTTTTTGAA CCTAATCGAA TTGCTGGTAG CGTTCCTTCA GGCGTTTATC
TTCACTCTGC TGACGGCGAT GTACATCGGC AGCGCGGTTG AAGAACATCA CGATGCCGAC
CACGGCATTG GTTACGAAGG TACTACTTCC GAATTAGGTT AA
 
Protein sequence
MLRSAINRIL LATALILSSL VGAQAQEHAH EGEAHANHEG EAKAAKGKFD VGGMIMHHIK 
DDHGWEFAHG VTLPLPVILY SKDRGLEVFS SSNLAHEATY NGYKNVHGKI HRVNEAGEVD
HEAKVYNFSI TKNVASLLLS AVIMLLVFSA VSRGYAKNKG KAPSGIQSFL EPIILFVRDE
IAKPSIGPKY TKYLPYLLTL FFFILVNNLL GLLPGAANLT GNITVTLVLA VITFVIVTFS
GNKHYWLHIL KPTGVPVALL PIMIPVEIVG VFMKPLSLMI RLFANITAGH IIILSLLGLI
FMANNMGGMG TSVAISPVVL FFTLFLNLIE LLVAFLQAFI FTLLTAMYIG SAVEEHHDAD
HGIGYEGTTS ELG