| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_3199 |
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| Symbol | |
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| ID | 8726952 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | - |
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| Start bp | 3873044 |
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| End bp | 3875866 |
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| Gene Length | 2823 bp |
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| Protein Length | 940 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | |
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| Product | two component transcriptional regulator, AraC family |
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| Protein accession | YP_003388009 |
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| Protein GI | 284038079 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.157032 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.236848 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTTACA CCCTTCGTGG CTTTGTAGCT GTCTATAGGC TTCGATCAAT TAAATCGCGA
TTGAGTAAGG GAACCTTTGG CTTTCTGCTC TCGGTAACGC TGCTGCTGCT GATGGCAGGC
TGTCAGTCGG CAACAAAGAC CAAAACATAC CGGATTGGCT TCTCGCAATG CACAGGGGGC
GACGAATGGC GAAAGACGAT GCTGCATGAT ATGAAACGGG AGTTGACGTT TCATCCCAAT
TACACCCTCC TCTACGAAGA TGCCGAAAAC AGCACGACCC GCCAGATTAG CCAGATCCAG
GCACTGATCG ATCAGGGCAT CGATCTGCTG ATCGTTTCAC CCAATGAAGT GGCTCCATTT
GCCAAAGTTA TCGAAGACGT TTTTAAGCGA GGTATCCCGG TCATTCTGCT CGATCGTAAA
ATCGAAACAG AGTCCTACAA CGCTTATATC GGTGGCGATA ACGTCGAAAT TGGCCGGTTA
GCGGGTGTTT TTATTGGCAA TCACCTAAAA GGGAAAGGAC GGATCGTTGA AATTTGGGGG
TTGCCCAGTT CATCACCGGC TCAGGAACGG CACCGGGGAC TTCTGGAGGA GTTAAGGAAA
TACCCCGGCA TTCAGGTGGT TAAAGAACTG AATGGACAGT GGGAGCGCGA TACTGTAGGT
CGGGTAGTGG CTGCGGAATT GAACACCCTG AAGGATGTCG ATCTGGTATT TGCCCACAAT
GATGTAATGG CCCTTGGCGC GTATGCCGTC TGTAAGCAGA AGGGTATCGA AAAAAAACTT
GATTTCGTTG GAATCGACGC TCTACCGGGT CCCAACGCGG GTATGCAGGC AATTACAGAC
GGAATTCTGA AAGCCAGCTT TTTGTACCCA ACGGGTGGAG AAGAAGCCAT TGAGACAGCT
ACGCGGATTC TGGCCGGAAA ATCGGTAAAA CGGGAACAGG TGCTCAACTC CATTCAGATA
GATGGGTCGA ATGTCAGGGC ACTAAAAGCA CAAAGCGATA AGCTGTTGGC CCAGCAAGTC
GACATTGAAA AGCAAAGCCA GCGCATTGAC GCCCTAACAC AAACCTACGC GTCCCAGAAA
AACACCTTAT ACATCACGCT GGCCAGCCTG ATCGTCGTTA TGCTGCTGGG GGGCTGGGCG
TTGTACCTCT TCCGGTCGAA GCAAACAGCT TACCGGACGC TTGAACGCCA AAACGAAGAA
ATACGGGAAC AGAAAGATAA AATAGAAGCG GTGTCGCAGC AGGCACGGCT GGCAACGGAA
GAAAAACTTC GGTTTTATTC TTATATCTCT CACGAATTCA ATACGCCCTT AAGCCTGATT
CTAACGCCGA CGGAGGATCT GCTGACCAAG AAGACCGTCA GTTCCCACGA CCTGAAAAGT
AACCTGGCCC TCATCCAGAA AAACGCCTAT CGGCTGCTGC GGCTGATCGA TCAGATGCTG
GACCTCCGCA AAACAGATGC CGGTAAACAA CGCCTTCGTA CGGTTGAACA GGACCTGGTT
GCCTTCATTC AGGATATCGT TCAGGATTTC AAACGCAAAG CGGAAAAGCA GCGGATCGAC
CTTCGGTTTA TGCCGTCGAA AGCCAGCCTG CCGGTTTGGT TCGACGAAGA GAAGCTCGAT
AAAGTCATCG TCAATCTGTT GTCTAACGCG TTCAAGTATA CGCCGAAGGG TGGGCTGATT
CATGTTCGGC TGGATGTGCT GGATAATCGG GTATGCATTC AGGTAGAAGA TAATGGCGAG
GGTATGACGC CCGATGAACA GGCACATGCC TTCGACTTGT TCTTCAGCGG TACCCGACCG
TTCAACCTCT CGAAAGGATT GGGGCTGGCG CTGTCGATGG AGTTTATTCA ATTGCATCAG
GGTGATATCA GTGTGAAGTC CGAAAAGGAT AAAGGAACAA CGTTTACCAT TCTGCTGCCT
CTGGGCAAGG ACCATCTGGC CGAGGAGGAA ATGGATCAGT CGGGGCCTCG AAATACATTA
AGAGAAGGGG CGTTCGTTTC TCCGCGCCTG CTGGTTGATG TGGAAGAGGA GGAGAGTACG
CTCCCTGCGG ATCTCACACA AAAACGGTCG GGGACCCTGC TGGTCGTTGA AGATAACGAC
GACATCCGGA CGTTTCTAAC CACCCGATTG GGTCATGAGT TTGAGATTAT TGCCGAGGGT
ACCGGCGAAA AAGGCTGGGA ACGGGCCATT GACGTGATAC CCGATCTGAT CATCAGTGAT
ATCATGCTGC CGGGTATGGA TGGTATGCAG CTGACCCAGC GCGTAAAGGC TGATCTGCGT
ACGTCACACA TTCCGGTGGT GCTGCTAACG GCCAAAGGGC AAATGGAGCA ACGCATTGAA
GGCACCCGCG CCGGAGCCGA CGCTTACATC ACCAAGCCGT TCAACACCAC GTACCTACTC
GAAGTGCTGC GTACCACGCT CGCCAATCGG GAGAAGTGGC AACGACGGTA CGCATCCGAC
TTTCTGTCGC AGGCAGGTGC GGGTAATCGG CAGGACAAGA AGTTCCTGAA TGAGTTAACC
GGACTAATCG AGCAAAATCT CACCGACCCC GACTTTGGCG TCGAGAAGCT GAGCCGCGAT
ATGGGCCTGT CGCGGGTGCA ACTTTACCGA AAGGTGCAGG CCCTGCTGGA TATGAACGTG
ATTGATTACG TAGCCGAAAT ACGCCTGAAA AAGGCCCGGC GTCTGCTGAC TGAAAGTACC
AAAACAATGG CCGAAATCGC TTACGAAACC GGCTTCAGCT CACCAGCCTA CTTCACGACT
TTTTTTAAGC AGCACACGCA AAAGACCCCT TCGGAATACC GAAAATCACC GGCAAGCGCG
TGA
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| Protein sequence | MSYTLRGFVA VYRLRSIKSR LSKGTFGFLL SVTLLLLMAG CQSATKTKTY RIGFSQCTGG
DEWRKTMLHD MKRELTFHPN YTLLYEDAEN STTRQISQIQ ALIDQGIDLL IVSPNEVAPF
AKVIEDVFKR GIPVILLDRK IETESYNAYI GGDNVEIGRL AGVFIGNHLK GKGRIVEIWG
LPSSSPAQER HRGLLEELRK YPGIQVVKEL NGQWERDTVG RVVAAELNTL KDVDLVFAHN
DVMALGAYAV CKQKGIEKKL DFVGIDALPG PNAGMQAITD GILKASFLYP TGGEEAIETA
TRILAGKSVK REQVLNSIQI DGSNVRALKA QSDKLLAQQV DIEKQSQRID ALTQTYASQK
NTLYITLASL IVVMLLGGWA LYLFRSKQTA YRTLERQNEE IREQKDKIEA VSQQARLATE
EKLRFYSYIS HEFNTPLSLI LTPTEDLLTK KTVSSHDLKS NLALIQKNAY RLLRLIDQML
DLRKTDAGKQ RLRTVEQDLV AFIQDIVQDF KRKAEKQRID LRFMPSKASL PVWFDEEKLD
KVIVNLLSNA FKYTPKGGLI HVRLDVLDNR VCIQVEDNGE GMTPDEQAHA FDLFFSGTRP
FNLSKGLGLA LSMEFIQLHQ GDISVKSEKD KGTTFTILLP LGKDHLAEEE MDQSGPRNTL
REGAFVSPRL LVDVEEEEST LPADLTQKRS GTLLVVEDND DIRTFLTTRL GHEFEIIAEG
TGEKGWERAI DVIPDLIISD IMLPGMDGMQ LTQRVKADLR TSHIPVVLLT AKGQMEQRIE
GTRAGADAYI TKPFNTTYLL EVLRTTLANR EKWQRRYASD FLSQAGAGNR QDKKFLNELT
GLIEQNLTDP DFGVEKLSRD MGLSRVQLYR KVQALLDMNV IDYVAEIRLK KARRLLTEST
KTMAEIAYET GFSSPAYFTT FFKQHTQKTP SEYRKSPASA
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