Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_3184 |
Symbol | |
ID | 8726937 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 3860062 |
End bp | 3861387 |
Gene Length | 1326 bp |
Protein Length | 441 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | |
Product | sugar transporter |
Protein accession | YP_003387994 |
Protein GI | 284038064 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.137091 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTCAAA AGCAACGCAT CTTTTTCTGG TCCATCACAG CCGCCCTGGG TGGCTTTCTG TTCGGTTTCG ATACAGCCGT TATTTCCGGC GTCGAGCAGT CACTGCAAAC GTTATGGCAT CTGAACGTTT GGGAGCATGG ATTAACAGTG TCCATTGCCC TCATCGGTAC CGTAGTGGGC TCCATGCTGG GGGGGATTCC AACGCAGCAA CTGGGCCGTA AAAAAACGTT GTTCTGGATT GCGGTTCTTT ATTTAGTAGC CTCCATTGGT ACGGCGATGG CTACCAGCTG GCCCGTTTTT CTCGTCTTCC GGTTTCTGGG TGGCCTGGGC GTCGGCGCTT CGTCGGTGGC GGCACCCATG TACATTACGG AGATTTCGCC TGCTAAGTCG CGCGGTAAGC TGGTGGGTAT GTTTCAGTTC AATGTGGTAT TGGGTATCCT GATTGCCTAC CTCTCCAATT TCCTTTTGCA AAGTTTGGGC GACGATTCGT GGCGCTGGAT GCTGGGCGTA CAGGCGCTGC CTTCGCTGAT TTTTCTAATT GCCGTACTCA ACATTCCGGA AAGCCCCCGC TGGCTGTTAC TGGCAAAAGG CCGGGTAGCA GAAGCCCGCG AGGTACTGAA CATGATCGAC CCGGAAACGG CCGACGAGAC TTTACTGGCC CTACAGGATA ACGCAGAGCA TCAGAATAAA AATGCCCGGT TGTTTTCCGG TCAGTACAAC ACACCCGTTA TGCTGGCAGT GCTGTTTGCC GTATTCAATC AGGTATCTGG TATTAACGCC ATCATTTATT ACGCCCCCCG TATCTTTGAA ATGACCGGCT TGGGTAAGAG TTCGGCCCTG TTGTCGTCGG CGGGAATTGG TCTGGTAAAC CTGATTTTCA CCATGATTTC CATGAACCTC ATTGACCGCT TTGGCCGACG CACGCTCATG AAGATTGGCT CGGTAGGGCT TATTGTCACG CTGGCTTTGG TGGCGCGCGC TTTTTACGTG GAGGATTTCA GTGGTATGAC GGTGCCACTG CTGCTGTTCG GCTACATTGC TTTCTTTGGC TTTTCGCAGG GGGCGGTCAT ATGGGTCTTT ATTTCGGAAA TATTTCCGAA TGAGGTGCGC TCGGGCGGGC AGGCGCTGGG TAGTTTTACC CACTGGTTCA TGGCCGCTAT AATTACCTTC TCATTTCCGT ATCTGGCTGA ACATTTTGGC GGTGGAAACA CTTTTCTGTT CTTCACCATC ATGATGGTGT TGCAGCTTCT GTTCGTGGTA CGGCTCATGC CCGAAACGAA AGGAACCAGT CTTGAAAAAA TCGAAAAAAC ATTCGTTGTC CATTAA
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Protein sequence | MSQKQRIFFW SITAALGGFL FGFDTAVISG VEQSLQTLWH LNVWEHGLTV SIALIGTVVG SMLGGIPTQQ LGRKKTLFWI AVLYLVASIG TAMATSWPVF LVFRFLGGLG VGASSVAAPM YITEISPAKS RGKLVGMFQF NVVLGILIAY LSNFLLQSLG DDSWRWMLGV QALPSLIFLI AVLNIPESPR WLLLAKGRVA EAREVLNMID PETADETLLA LQDNAEHQNK NARLFSGQYN TPVMLAVLFA VFNQVSGINA IIYYAPRIFE MTGLGKSSAL LSSAGIGLVN LIFTMISMNL IDRFGRRTLM KIGSVGLIVT LALVARAFYV EDFSGMTVPL LLFGYIAFFG FSQGAVIWVF ISEIFPNEVR SGGQALGSFT HWFMAAIITF SFPYLAEHFG GGNTFLFFTI MMVLQLLFVV RLMPETKGTS LEKIEKTFVV H
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