Gene Slin_3167 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_3167 
Symbol 
ID8726920 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp3836608 
End bp3837828 
Gene Length1221 bp 
Protein Length406 aa 
Translation table11 
GC content50% 
IMG OID 
Productresponse regulator receiver protein 
Protein accessionYP_003387977 
Protein GI284038047 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGTTTG ACTTCAACAC GTATTCGTCG CCCCTGTTAT TTGGCTTTGT GCAGGGCTGG 
ATTTACGCTA TCTTATTGTG GGTGAGGGCT CGTCGTGAAG AACGGCTGTC GGACTGGTTG
CTGGGCTGGG TGCTGGTGGG GCAGAGCTTC AATATATGGG AGTATATGCT CGGATTTGGC
GGTATTGAGA TTCTCTGGCG CGAACTGGAG TTTTTCCCCC GTTCGCTCGG CTATCTGTTT
CCGGTTCTAT GCTATTTCTA CCTCAAAAGT CAGGTTAATG CCGATTTTCG ATTCTCCCGG
CGCGACATCT GGCATGCCGT TCCGTTTCTG GTTCAGGTTA CCTATCACCT CATCGTTTTT
TCGAAGGGCC ATGATTTTGT CGAGCAGTGG AAAACAACGG TACACTACCC CTATCACCTG
GAGGATGTTG AGTTTTTTGT GGGTGTTGGC CTGGATGTAT ACTACCTGAT TTTGTCCCTG
CGCCTGTACC GGCACTACCG GGCCTGGATA AAAACGCAGT TTTCAGAAAC CGAAACCATT
AGTTTCCGCT GGTTCCGAAA CTTCTTAGTC GCCCTCACGG CCGCGATGTT GTTCAGTCTG
TTCATGACGC TGATTAGTGC GACGTTCAAT CTCGATTTCT GGCAGAACTG GTGGGACAAA
CTGGCGGGTG TCGTCCTGAT TTATTACGTG AGTATTCACG GTTACGCGCA GGCACAGCCC
GGTCGGCGGT TAACGTTTTA TCCGGTGTCG GCAGAAGAGC CCTCTGCGCT GACTGAATTG
TTGCCTGACA GTGACCATGT CATGCAACGG GAGCCGGTGC TGGTGAATCA AACCGTAGAT
AATCAACTGG TAAAAACGTC TACGGGTCTG ACAACGGATT TAATGCCTTG GCGTGACACC
TTATTGACGT ATATGGAAAA CGAACGCCCG TACCTGGACC CCGATTTGTC TCTGACCGAT
CTGGCCCGCC GACTTAAGAC CAATGCGTCC GTATTATCGC AGGTCATCAA TGCCGGAACT
GGCAAAAATT TCAACGATTT TGTAAACCAG TACCGGGTAG ATGATTTTAA ACAACAGGCT
CTCGATCCTG CTAATGGTCA TCTGAGTTTA TTGGGTATTG CGCTCGAAAG TGGCTTTAAT
TCGAAAGCTA CGTTCAATCG TGCCTTCAAG AAACTAAGCG GTCAGTCGCC CAGAGAATTC
GTTGAGTCGG TAGAGCGATA G
 
Protein sequence
MTFDFNTYSS PLLFGFVQGW IYAILLWVRA RREERLSDWL LGWVLVGQSF NIWEYMLGFG 
GIEILWRELE FFPRSLGYLF PVLCYFYLKS QVNADFRFSR RDIWHAVPFL VQVTYHLIVF
SKGHDFVEQW KTTVHYPYHL EDVEFFVGVG LDVYYLILSL RLYRHYRAWI KTQFSETETI
SFRWFRNFLV ALTAAMLFSL FMTLISATFN LDFWQNWWDK LAGVVLIYYV SIHGYAQAQP
GRRLTFYPVS AEEPSALTEL LPDSDHVMQR EPVLVNQTVD NQLVKTSTGL TTDLMPWRDT
LLTYMENERP YLDPDLSLTD LARRLKTNAS VLSQVINAGT GKNFNDFVNQ YRVDDFKQQA
LDPANGHLSL LGIALESGFN SKATFNRAFK KLSGQSPREF VESVER