| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_3102 |
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| Symbol | |
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| ID | 8726855 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | - |
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| Start bp | 3762128 |
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| End bp | 3766384 |
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| Gene Length | 4257 bp |
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| Protein Length | 1418 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | |
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| Product | signal transduction histidine kinase with CheB and CheR activity |
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| Protein accession | YP_003387912 |
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| Protein GI | 284037982 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCAGTC AACGTTCTTT AAACGCTATA AACTCCTCAA CGGTATCTTC GATTCCAGTA
GTCGCTATCG GTGCATCGGC CGGTGGACTG GAAGCTTTTT CTGAACTCCT AAACCATCTT
TCGCCAGCTA CCGGTCTGGC TTACGTTTAT ATCCAACACC TTAACACATC GGCTGAAAGA
CATCTGTCGT CTATTCTGGG CCGGACAACA GAAATGAATG TTAAGGAAGC AGAACACCTG
GTGAAAATTG AGGCCAATAC GGTTTATATA ATTCCGCCGG ACAAAAATAT GGAAATCGTG
GATGGGGTAC TGACTCTCAT GCCACGCCGA AAGAAAGCCG TAAAAGGAGA GTCTGCGGAG
GACGTTCAAC CCCCGCACAT GCCCGTCGAT CAGTTCTTTA CGTCCCTGGC CGAACGGCAG
AAGGAGGGTG CCATTGGTAT CGTGCTTTCC GGAATGGCCC ACGATGGAAC GCTGGGCCTG
AAAGCGATTA AAGTAGCGGG TGGCATTACG ATTGTACAGG ACTCATCCGC AAAATTTCAG
GGGATGCCCC AGTCGGCCAT TGCAGAAGGG GTCGTCGATA TGATTCTATC GCCAGCCGAA
ATAGCGCACG AATTGGAACA TCTTAGTAAG CAAGCCGCTA TTTTTGAGCA AACGGTCATA
GCCGAAAGTC ATGCCGAACC TGATGCTAAT GAATTAACAG AATCGCCCAG TGAGGAATTG
CAGCCCATCA TTCAGTTTCT GCGACGGGCT ATAGGTGTCG ACTTCAGCAA TTATAAAATG
ACTACCATTC GCCGGCGGAT TATTCGGCGT ATGTTACTGT ACAAACTCGA CACGCTCAAA
GCGTATTTAC AGTACCTGCG CGAGCATCCC ACCGAGCCGG GTCTGCTCTA CAATGATTTG
CTGATCAATG TAACCAGCTT TTTTCGGGAT GAGGAAACCA TGGAGTTTCT GAAGGTGAAT
ATTATTCCCG AACTCATCAG GCAAAAAAAC GACCGTCTCC CTTTACGTAT CTGGGTACCC
GGTTGCTCAA CAGGGCAGGA GGCCTATTCG CTGGCCATGC TCATGCTGGA AACGCTCGAT
AAAGAAGCGC CGGGCGTGAC CATTCAGATT TTTGCTACCG ACCTCAGCGA AAACGCCATT
AACCGGGCCC GGCAGGGGCT CTACTCTGTT AGTGAGGTGG CGAACATACC GCCCAAACGA
CTTCAGCGCT TTTTTACAAA GCACCAGTCG ATGTATCAGA TCAACAAGAC GGTCCGGGAT
ATGTGCGTGT TTGCCCCGCA CAATATATTT AAAGATCCCC CTTTTTCCCG AATTGACCTG
ATCAGCTGCC GTAATCTGCT GATTTACCTG AATACCCTGT TACAACGAAA AGCACTCATT
ACGTTTCACT ATGCATTGAA TCATGACGGG TATCTACTGC TGGGTAAATC AGAAACGGTA
TCAGCTTCTT CGGCACTGTT CAGGCCCATT GACAAAAATT ATAAGATATT TGTCCGTAAG
AATGATCGAT CTGCTGGGGT AGTAGTGAGC CAGGTAGTTA TTGATCGGAA AGATGGGCAG
GAGCAATCCC GCTCGCCAAG CCTCAGGTCG AGCGATGGAG GGAGCCCTAA ATATCAACCA
GGTAAAGCAC GCCAGACTGT GAACGAGTTA GACAAGATTG TGGACCAGGT ACTGCTCCGC
CAATTTACGC CCGCCAGTGT GGTGGTAGAT CAGGAACTGG ATATTCTTCA GTTTCGGGGA
GAAACCAGCC TGTTTTTGGA ACATGTGTCG GGGCGTGCCA GCCTGAATCT GTCGAAAATG
GCTCGTCCCG CCCTGGCCTT CGAAATTCGG AATGCGGTAC GAAAAGCCCG GAAATCGGGG
CAGAAAGAAA GCAGGACAGG CATCGAAATA ACGGTGAGCG GCCGAAAATA CCTGGTTTCT
ATTGAGGTAG TGCCGTTGAA CGACGCTACC GAAGGGCGTT TATTTTTAAT CCTGTTTCGG
GAGGAGCATG GCCTGCCAAC GGACGACCTG GCCTCGGTCA GCGGCCGAAA TAACCGGGTC
AAACAACTGG AAGAAGAACT GGCCACGATG CGGGAGGACA TGCGCGCCAT TATTGAAGAG
CATGAAATTG CCAGCGAAGA ACTTCAGTCG GTCAACGAAG AGATCGTGAG CAGCAATGAA
GAGCTGCAGA GCATCAACGA AGAGCTGGAA ACCAGCAAGG AAGAGATAGA ATCGACCAAC
GAGGAGTTGC AGACCATCAA TCAGGAATTG CAGATACGCA ATGACCAGTT GGCTGAAGCG
TACATGTACG CCGAAGCTAT TTTTTCGACC ATCAGCGAAG CGACCATCGT ACTCGATAAA
CACCTGCGGG TGAAGAGTGC CAACCGGGCC TTTTTTCAAA TATTCAAAAT ACCCGAAGAA
GCGACCATCG GGCGGCTGAT TTATGAACTC GGCAACCGGC AGTGGGACAT TCCGCGTCTG
CGCGAGTTGC TGGAGGAGGT TATCCAGAAA AATGTGCTGA TTCAATCGTT CGAGGTGAGG
CACCAGTTTC CGGGAGTGGG CGAAAAAGTG ATGTTGATTC ACGCCCGCCG GGTTATTGAG
CAGCACCGGC AGGAGGCCAT TCTGTTGGCT ATTGAAGATA TTACCGAGCA GCAGCAGGTA
CAGCAGTTGC TGGAAGAACG GCAGGCCTGG TTTCATACCC TGATCGATAA GGCACCCATA
CTGATCTGGG TTGCCGATAG CGATGGCCGG TATAGCTTTT TCAACAAAGC CTGGCTCGAT
TATACCGGTC GGTCGTCCGA GCAGGAAACT GGGCAGGGCT GGATGATGGA TATTCATCCT
GAAGACCGAG CCGCCTACAT TGCTACGGTC ATCACCAACT TTGGGGCCCG CCAGCCATAC
CAGGCCGAAT ATCGTCTGAA ACGGAATGAT GGCGAATACC GCTGGATGAT GGAAAATGGC
CAGCCGACCT TCGATACCGA CGGTAATTTT AGCGGATACA TTGGTACCTG CGCTGAAGTT
CATGTGCAGA AAAGCCTCAA CCAGGAGCTG GATAGCCGGG TGCAGTCTCG CACCAAAGAA
CTGACCAAAG CCAATTCGCA GCTTCTGAAA TCCAATACAG AACTGGCACA AACTGCCGAA
AATCTACAGG CCGTACTTAA TACATCGCCA GCGGCTATCG GCCTGCTGAA AGCTGTACGA
ATACCGGAAG GCGATTTAGT TGATTTTAAG GTGATTGTCT GTAATCAGAA ATTCGCTCAG
ATGGCCCATC AGCCAATTTC CAATCTGGCA GGAACATTAG CGACCGAACT GGCACCCGTG
CTGTGGCAGG AAGATACCCT GAACCAACTG CGGCAGGTTC ATAGAACCGG CAAAGTGGCT
TATCGGGAAC AGCATACCCA AATAGCCGGT TATGACCATT GGCTGGGTAT ATCGATCGAT
AAACATGACG ATGGTGTCAT CCTGACCGGG TTGGACATTA CGGCCTTAAA GCAGGCAGAG
ATTCAACAGG ATCGCTGGAT TCAGGAACTG GCACATTCCC AGAAAACGAT GCAGGATCTG
GAGCAGATGC GTCGCTATGT TCGGGAGCGG GGTGAGTTTT TACGGGCTAC CTCGCACGAT
CTGCGCGGTA GTTTCGGGGT TATTCAGGGG GCAGCCGCTC TTCTCAACCT GATGGATACC
AAAGAGGAGC GGGAGCAGAT GCTGAGTATG CTCAACCGAA ACCTGGGTCA GGTAACATCC
CTGCTGACTC AGCTTCTGGA CTATTCCCGG CTGGAAGCCG GTCAGGAACA GGTATTCAGC
CAGTCGTTCG ATGCGTCGCA TCTGTTTAGG GAGTTAAGCA CGAGTATGGA GCCTTTGGCT
AAAGACCGAG GGCTTTGGTT AAAAGTACAC GGTCCCGACA CCCTGCCCGT TACCGGCGAC
ATGGTAAAAG TGCAGCGTAT TGCTCAAAAC CTTATTCTGA ATGCGTTGAA ATACACCCGC
GAGGGGGGAG TAACCATATC GTGGGAGTTG GGCGAGGGCA ATACCGGCTG GCAATTCAGT
GTGTCAGATA CGGGTCCCGG TTTGCCCGAA GAAGCCGCCC GACAGCTTGT CGATTCACCT
AATTCAGGGT CGCCTAATGC TACTAAATTG GAGTTAGCAC CCAAAGAAGG TGGTTCTGGT
GAAGGAATCG GTCTGTCAAT CGTCAGGCAG CTCAGCAATT TGCTGGGGGC CACCTTATCT
GTAGAAAGCA GTATGGACAA AGGGACATTG ATTGAAATAC GCTTTTCTAA ACAGTAG
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| Protein sequence | MPSQRSLNAI NSSTVSSIPV VAIGASAGGL EAFSELLNHL SPATGLAYVY IQHLNTSAER
HLSSILGRTT EMNVKEAEHL VKIEANTVYI IPPDKNMEIV DGVLTLMPRR KKAVKGESAE
DVQPPHMPVD QFFTSLAERQ KEGAIGIVLS GMAHDGTLGL KAIKVAGGIT IVQDSSAKFQ
GMPQSAIAEG VVDMILSPAE IAHELEHLSK QAAIFEQTVI AESHAEPDAN ELTESPSEEL
QPIIQFLRRA IGVDFSNYKM TTIRRRIIRR MLLYKLDTLK AYLQYLREHP TEPGLLYNDL
LINVTSFFRD EETMEFLKVN IIPELIRQKN DRLPLRIWVP GCSTGQEAYS LAMLMLETLD
KEAPGVTIQI FATDLSENAI NRARQGLYSV SEVANIPPKR LQRFFTKHQS MYQINKTVRD
MCVFAPHNIF KDPPFSRIDL ISCRNLLIYL NTLLQRKALI TFHYALNHDG YLLLGKSETV
SASSALFRPI DKNYKIFVRK NDRSAGVVVS QVVIDRKDGQ EQSRSPSLRS SDGGSPKYQP
GKARQTVNEL DKIVDQVLLR QFTPASVVVD QELDILQFRG ETSLFLEHVS GRASLNLSKM
ARPALAFEIR NAVRKARKSG QKESRTGIEI TVSGRKYLVS IEVVPLNDAT EGRLFLILFR
EEHGLPTDDL ASVSGRNNRV KQLEEELATM REDMRAIIEE HEIASEELQS VNEEIVSSNE
ELQSINEELE TSKEEIESTN EELQTINQEL QIRNDQLAEA YMYAEAIFST ISEATIVLDK
HLRVKSANRA FFQIFKIPEE ATIGRLIYEL GNRQWDIPRL RELLEEVIQK NVLIQSFEVR
HQFPGVGEKV MLIHARRVIE QHRQEAILLA IEDITEQQQV QQLLEERQAW FHTLIDKAPI
LIWVADSDGR YSFFNKAWLD YTGRSSEQET GQGWMMDIHP EDRAAYIATV ITNFGARQPY
QAEYRLKRND GEYRWMMENG QPTFDTDGNF SGYIGTCAEV HVQKSLNQEL DSRVQSRTKE
LTKANSQLLK SNTELAQTAE NLQAVLNTSP AAIGLLKAVR IPEGDLVDFK VIVCNQKFAQ
MAHQPISNLA GTLATELAPV LWQEDTLNQL RQVHRTGKVA YREQHTQIAG YDHWLGISID
KHDDGVILTG LDITALKQAE IQQDRWIQEL AHSQKTMQDL EQMRRYVRER GEFLRATSHD
LRGSFGVIQG AAALLNLMDT KEEREQMLSM LNRNLGQVTS LLTQLLDYSR LEAGQEQVFS
QSFDASHLFR ELSTSMEPLA KDRGLWLKVH GPDTLPVTGD MVKVQRIAQN LILNALKYTR
EGGVTISWEL GEGNTGWQFS VSDTGPGLPE EAARQLVDSP NSGSPNATKL ELAPKEGGSG
EGIGLSIVRQ LSNLLGATLS VESSMDKGTL IEIRFSKQ
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