Gene Slin_3088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_3088 
Symbol 
ID8726841 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp3745507 
End bp3747015 
Gene Length1509 bp 
Protein Length502 aa 
Translation table11 
GC content48% 
IMG OID 
ProductSite-specific DNA-methyltransferase (adenine- specific) 
Protein accessionYP_003387898 
Protein GI284037968 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.143322 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.282714 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACACA ATCTTTCTGG AATAATTAAA TCTATTCGTG ACATCATGCG CGAAGATCGG 
GGCGTTAATG GCGACGCTCA GCGCATTGAA CAACTCGGCT GGATGCTGTT TTTGAAAATA
TTTGATGATA AAGACATCGA AATGGAATTG CTGGCCGATG ATTACCAGTC CCCCATTCCT
ACCGATTGCC AATGGCGCAA TTGGGCGGCT GATAATGAAG GCATAACCGG CGATGAACTC
CAGCAGTTTG TTGATCTGAC ATTGTTTCCT ACTCTCAAGA ACTTGCCCGT AAAGGATGGC
AACCGACGGG CCTTGCTCAT TCGAGAGGTG TTTGAAGGGA ACAACAACTA CATGAAGTCG
GGGATTAACA TCCGCAAGAT TTGTAATAAG CTCAATGAAA TAGACTTCAA TAGCTCGGAA
GACCGACACC TGTTTGGCGA CCTTTACGAA GGTATATTGA AAGAACTGCA ATCGGCGGGC
GACAGTGGGG AGTTCTATAC ACCCCGCGCC GTTACGCAGT TTATGACCGA AATGGTGAAC
CCCCGCCTGG GCGAAATCAT CTTCGATCCA GCTTGCGGTA CAGGGGGCTT TCTGGTCAAT
GCCATTGAAC ATATCCGACA ACGGGAAGTA AACAGCGTAG ACGACCGGCT GACGCTGCAA
AAGACCATAC GGGGCTGCGA ATACAAACCG CTGCCCTACG AACTGGCTCT AACCAACCTG
ATTCTGCACG ATATTGAAGT GCCGAACATT GAATACGGTG ACAGCCTAGG CCGCGAGTAC
AGCAGCATTC GCGACCGCGA CCGGGTTGAT GTCATTCTGG CCAATCCACC TTTTGGCGGA
ACCGTAGCTA ATGGCAACGA AGGCAATTTT CCGGCTAATT TCCGTACACG CGAAAGCGCC
GACTTGTTTT TGGTTTTGAT CGTAAACCTG CTCAGAACAA ACGGACGGGC AGCTTTGGTA
CTACCCGATG GCTCCCTGAC GGGCGAAGGC GTAAAGCAGC GTGTTCGGCA GAAACTGCTG
GAAGATTGCG ACCTGCATAC CATTGTCCGC TTGCCGAACT CGGTGTTTCA GCCCTACGCT
ACGGTAGCCA CAAACCTGCT CTTCTTTGAG AAGAAACGCA CCACCGGATT AGCCGCACCT
GATAGTGACT TGCCATTGTT CAGCAACGGC GAAACAAATG ACAGTGACCG TTACGCTACT
CGCGAAATCT GGTATTATGA GCACCGATTG CCCGAAGGCC AGAAATCGTA CTCGAAAACA
AAAACGATTC AGCTAAAGGA ATTTGAACCA CTGAAAGCAT GGTGGACTAA TCGTGTTGAA
TCGGATCAGG CTTGGCGAGT GCCTATTCAG ACTATAATTG ATAGAAAGTT TGATCTGGAT
ATAAAGAACC CGAATCGGAA AGAGGAAGTC ATGGAATTTA ACAGTACTGA ATTGATTGAT
AGAATCATCG CGGGAAACCA ACGTGTAACA GCGATTTTAG AAAAACTGAA AATAGATTTA
GTGGCCTGA
 
Protein sequence
MAHNLSGIIK SIRDIMREDR GVNGDAQRIE QLGWMLFLKI FDDKDIEMEL LADDYQSPIP 
TDCQWRNWAA DNEGITGDEL QQFVDLTLFP TLKNLPVKDG NRRALLIREV FEGNNNYMKS
GINIRKICNK LNEIDFNSSE DRHLFGDLYE GILKELQSAG DSGEFYTPRA VTQFMTEMVN
PRLGEIIFDP ACGTGGFLVN AIEHIRQREV NSVDDRLTLQ KTIRGCEYKP LPYELALTNL
ILHDIEVPNI EYGDSLGREY SSIRDRDRVD VILANPPFGG TVANGNEGNF PANFRTRESA
DLFLVLIVNL LRTNGRAALV LPDGSLTGEG VKQRVRQKLL EDCDLHTIVR LPNSVFQPYA
TVATNLLFFE KKRTTGLAAP DSDLPLFSNG ETNDSDRYAT REIWYYEHRL PEGQKSYSKT
KTIQLKEFEP LKAWWTNRVE SDQAWRVPIQ TIIDRKFDLD IKNPNRKEEV MEFNSTELID
RIIAGNQRVT AILEKLKIDL VA