Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_3070 |
Symbol | |
ID | 8726822 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 3720020 |
End bp | 3721084 |
Gene Length | 1065 bp |
Protein Length | 354 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | |
Product | beta-Ig-H3/fasciclin |
Protein accession | YP_003387880 |
Protein GI | 284037950 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0201984 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.916822 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACTTAT TCCCCGACAA CGTTATGAAA ATCAAGCAGA GTTTTAGCCT TTTAGCGCTG GGAACAACGC TACTTGCCGC ACCCGTCTGG GCGCAGACAA CACCTACTGG AGCCGCCACA TCAACAACTT ATCCGCAGGG AGCTATAGCC ACCGATTCTA TGCCAGCCAA GCCTTCCCGC GAGCAGAAAC GAGCCATGAA GCGAAATAAA AGAGCCACCA ACCAGAAAGC GGGTACCACG GGTACGACCA CCAATACCTC CCCGCAGGAT GCGGCTTACC GGGAGAGTTC ATCTAGTATA GGCACGGCGG TAAACAACAG TAATACGACC AACTACAACA GCAACAACGT TACCAATGCC CCCACGGGTG CTGGTAGTAA CCCCAACGCC ATGGGCGCTT CGAACCCATC GCCCACCCCC GCAGATCAGG TGAGTAACGG GCAAAATAAC AGCGCGGCCC GCAGTTCGTC GAGCAGTGCG GGAGCCGCTT ATTCACCCAA TACGGGAGCT ACGGATTCCA ACGCGGGTAC TGCCGCAGCC GTAGCAGGCG AAAAAAACAG TAAAGAGCCT GCGGTAAAAG CCGGTAGCAC CGAACGGAAC ACCAGCATCG GTGACTTCGT GTCGTCGTCA CCCAATTTCA TTACCCTGCA AAATGCCCTG CAATCGGCCA ATTTGTGGGA AACCCTGAAA GGCTCGGGGC CTTATACCAT TTTTGCTCCG ACGAACAACG CCTTCAAGAA ACTCTCTTCA TCGGCGCAGG GGGCACTTCT GGATGGCAGC AACCGGGAAG CCTTAAAACA GCTCCTCTCG TATCATGTGG TGGATGGCTC GCTGAATTCG CAGGAACTGG CCCGCCAGGC AAAAGCCGGA AACGGGAAAG CACAGCTTAA AACACTGGCG GGTGGTACAC TCACCGTACA GGAATCAAAC GGTCGACTGA CGGTTACCGA TGAGCAGGGG CATACGGCCA CGGTAGAAGA TACCGGTAAT CGGCAGTCGA ACGGCATGAT TTACGGAATC AGCAACGTGT TAATGCCAAA ATCGGGCGTG GAAGCCTTCA AATAA
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Protein sequence | MHLFPDNVMK IKQSFSLLAL GTTLLAAPVW AQTTPTGAAT STTYPQGAIA TDSMPAKPSR EQKRAMKRNK RATNQKAGTT GTTTNTSPQD AAYRESSSSI GTAVNNSNTT NYNSNNVTNA PTGAGSNPNA MGASNPSPTP ADQVSNGQNN SAARSSSSSA GAAYSPNTGA TDSNAGTAAA VAGEKNSKEP AVKAGSTERN TSIGDFVSSS PNFITLQNAL QSANLWETLK GSGPYTIFAP TNNAFKKLSS SAQGALLDGS NREALKQLLS YHVVDGSLNS QELARQAKAG NGKAQLKTLA GGTLTVQESN GRLTVTDEQG HTATVEDTGN RQSNGMIYGI SNVLMPKSGV EAFK
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