Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_3027 |
Symbol | |
ID | 8726779 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 3663217 |
End bp | 3663882 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | |
Product | transaldolase |
Protein accession | YP_003387837 |
Protein GI | 284037907 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.32955 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAATTTT TCATTGACAC AGCCAATCTG GCTGACATTC GCGAAGCCCA GGATATGGGC ATTCTTGACG GTGTTACTAC TAACCCTTCA TTAATGGCGA AAGAAGGCAT TACGGGCAAA GACAACGTAA TGCGTCATTA CAAACAAATC TGCGAAATCG TACAAAGCGA TGTTAGCGCC GAAGTGATCT CGGTCAAATA CGACGAGATG ATCAAAGAAG GCGAAGAACT GGCTGATATC GACGAGAACA TCGTCGTGAA AGTGCCCATG AGTGGCGATA GCATCAAAGC GATCAAATAT TTCTCTGAAA AAGGAATCCG GACCAACTGT ACGCTAATCT TCTCGGCTGG TCAGGCTTTG CTGGCTGCGA AAGCAGGTGC TACTTATGTG TCGCCGTTCG TAGGTCGTTT GGATGATATC TCGACCGACG GTATGGCCCT CATCGAGCAG ATCGTCACTA TTTTCACCAA TTACGGCTAT TCGACAGAAG TCCTGGCGGC TTCGGTTCGT CACCCGATGC ACGTAATTCA GTGTGCGGAA ATTGGCGCTG ATATCATGAC GGCTCCCTTG AGCGTTATGA AACAACTGCT TAACCACCCA CTCACCGACA GCGGTCTGGC TAAATTCCTG GCCGACCACG AGAAGGCTAA CCTGCCGGTG AAATAA
|
Protein sequence | MKFFIDTANL ADIREAQDMG ILDGVTTNPS LMAKEGITGK DNVMRHYKQI CEIVQSDVSA EVISVKYDEM IKEGEELADI DENIVVKVPM SGDSIKAIKY FSEKGIRTNC TLIFSAGQAL LAAKAGATYV SPFVGRLDDI STDGMALIEQ IVTIFTNYGY STEVLAASVR HPMHVIQCAE IGADIMTAPL SVMKQLLNHP LTDSGLAKFL ADHEKANLPV K
|
| |