Gene Slin_3017 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_3017 
Symbol 
ID8726768 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp3652231 
End bp3653238 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content52% 
IMG OID 
Product3-oxoacyl-(acyl-carrier-protein) synthase III 
Protein accessionYP_003387827 
Protein GI284037897 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATACAG TTTATTCGAC AATAAAAGGA TTAGGGTTTT ATGTGCCAGA TAATATCGTT 
ACAAACGATG ATCTGACTCA ATATATGGAT ACGTCCGATG CCTGGATTCA GGAACGGACG
GGTATCAAAC AACGGCGCTA TTTCACCTAC GGCAAAGACA CTAACGCCAG CATGGCTACG
GCCGCTTCCC GCATGGCGCT GGACCGCGCC GGGCTGGAAG CATCGGCCGT TGACCTGATC
GTTTATGCAA CCATCACCCC CGATTACTAT TTTCCCGGCT CCGCTTTTCT GATGCAGCGC
GAACTGGGTC TGGATGGCAT TGGCGTCATT GATATTCGCA ATCAATGCTC CGGTTTTGTA
TACGCCCTCT CCATTGCCGA TCAGTTTATC AAAACGGGCA TGTACAAAAC GATTTTGGTG
GTTGGCTCCG AGATACAGTC GTCACTGCTC AACAAAAGCA ATGAGGGCCG TGGGGTAGCT
GTCATTTTTG GAGATGGCGC GGGGGCAGCC GTGCTACAGG CTACCACCGA CCCTGAACAC
CGGGTTCTCT CAACGCATCT CCACGCCGAC GGTCGTTATG CCGAAGAGTT GTATATCCGT
GATCCGGGTA GCAGCCGGGA TGGGCAATGG CTGACCGATG CTACCATCGC CGAAGGTAAT
TATAATGTTA CCATGAACGG TAATGCGGTC TTCAAACACG CGGTTGTTCG ATTCATGGAA
GTCATTAACG AGAGTTTGGC TGCTAATGGC TTTCAGCCCG AAGACCTTAG CCTGTTGGTG
CCGCACCAGG CCAACATCCG TATTTCGGGC TACGTACAGC AGCAAATGAA CCTGCCCGAC
GAAAAGGTAT TCAATAATAT TCAGCAGTAC GGGAACACCA CTGCCGCTTC CATTCCCATT
GCGCTTACAG AAGCGTTTGA GCAGGGGCGA ATCAAACCCG GCGACCTGGT TTGCCTGGCC
GCTTTTGGGA GCGGATTCAC CTGGGCATCG GCTTTGATTA AGTGGTAA
 
Protein sequence
MNTVYSTIKG LGFYVPDNIV TNDDLTQYMD TSDAWIQERT GIKQRRYFTY GKDTNASMAT 
AASRMALDRA GLEASAVDLI VYATITPDYY FPGSAFLMQR ELGLDGIGVI DIRNQCSGFV
YALSIADQFI KTGMYKTILV VGSEIQSSLL NKSNEGRGVA VIFGDGAGAA VLQATTDPEH
RVLSTHLHAD GRYAEELYIR DPGSSRDGQW LTDATIAEGN YNVTMNGNAV FKHAVVRFME
VINESLAANG FQPEDLSLLV PHQANIRISG YVQQQMNLPD EKVFNNIQQY GNTTAASIPI
ALTEAFEQGR IKPGDLVCLA AFGSGFTWAS ALIKW