Gene Slin_3012 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_3012 
Symbol 
ID8726763 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp3648777 
End bp3649550 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content50% 
IMG OID 
Productalpha/beta hydrolase fold protein 
Protein accessionYP_003387822 
Protein GI284037892 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTAT TCTTCCGGCA AACGGGTGAA ACAGGCCCGG CCATTGTCAT CTTACACGGC 
CTTTTCGGCT CCTCCGATAA CTGGCTTACA AACAGCAAAA CCATTGCCGC TCAGGGATAC
CGCGTGTTTC TCGTCGACCA GCGTAACCAC GGGCAATCGC CCCGTGCCGA CGACCAGGAT
TATCAGCATA TGGCCGATGA TTTGTGTGAA TTCCTGACCG ACCAGAAGCT GGACCAGCCA
ATTCTGGTCG GGCATTCGAT GGGTGGCAAA ACCGTTATGC AATATGCCAT GTCGTATCCC
GGTACATTTG CCAGACTTGT GGTTGTCGAT ATTGCACCCA AGTTCTACCC GATACACCAT
GCCGAAATCA TTCGTGGCCT GAAAGCGATT AATCTACTGG GTATAAAAGG CCGCAATGAA
GCCGACGCCG TTTTACAGGC CTACGAGCCC CTATTGCCCG TTCGTCAGTT TCTGCTTAAA
AACCTCTACC GAAATGAAGA CGGTGTATTC GACTGGCGAA TCAATATACC GGTCATTGAA
CGCGAGTTGC ACGGTATCGG CGAAGAGCTA ACAAACCCGA GCATTGTAAC CACCCCAACG
TTGTTTATCC GGGGCAGCGA GTCGCCGTAC ATCATTGACG ACGATATTCC AGCCATTAAA
CGTATTTTCC CGAATGCACA GATCGAGACA ATTCAGGGGG CCGGACATTG GGTGCAAGCC
GAAAAGCCCG TCGAGTTCGT AGACGCACTA ATGAACTTTA TACATAAGAA TTAA
 
Protein sequence
MKLFFRQTGE TGPAIVILHG LFGSSDNWLT NSKTIAAQGY RVFLVDQRNH GQSPRADDQD 
YQHMADDLCE FLTDQKLDQP ILVGHSMGGK TVMQYAMSYP GTFARLVVVD IAPKFYPIHH
AEIIRGLKAI NLLGIKGRNE ADAVLQAYEP LLPVRQFLLK NLYRNEDGVF DWRINIPVIE
RELHGIGEEL TNPSIVTTPT LFIRGSESPY IIDDDIPAIK RIFPNAQIET IQGAGHWVQA
EKPVEFVDAL MNFIHKN