Gene Slin_3010 details

Gene Information

• Locus tag: Slin_3010
• ID: 8726761
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Spirosoma linguale DSM 74
• Kingdom: Bacteria
• Replicon accession: NC_013730
• Strand: -
• Start bp: 3643977
• End bp: 3647366
• Gene Length: 3390 bp
• Protein Length: 1129 aa
• Translation table: 11
• GC content: 47%
• Product: hypothetical protein
• Protein accession: YP_003387820
• Protein GI: 284037890

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 35
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGTCTAAAA ATTTACTGCA ATTTCGACTG GCGCTCGTGC TAATCGGCAG TATTCTAATG 
GCTGTTCTCA GTGGGAATGC AGCCATAGCA CAGGTAACGA CGTCCGTTAT TAATGGGCTG 
GTAACGGACG ATAAAGGGGC GGCCTTACCG GGTGCTACCG TTGTTGCTGT GCATGAACCG 
TCGGGTAGCC GTTATGGTAC AACGACAAAC GCTTCGGGTC GTTATACGCT GCCGGGTGTG 
CGGGTAGGTG GTCCTTTCAG AATAACGGCC ACATTTGTAG GGTTCAAAGA TCAGGTAACC 
GAAGGTGTTT TCACTAACCT GGGTACGTCT TCGGATGTAA GTTTTAAAAT GGCTGATAAC 
AGCACGCAGT TATCAGAAAT CGTTGTTTCG GGTAATCAAA ATGGTATTAT CAGTTCCAAC 
CGGACCGGTG CTGCTACATC GTACGGCCGG GGAACGATCA ATACAATTCC AACTCTGGGT 
CGTACCATTG CTGATATTAC CAAATACAAT GCGTATGGTA ACGGTCAGTC GTTTGGTGGT 
CAGGATGCCC GTTTTAACAA TATTACGATT GACGGTGCTG TGTTCAATAA CGGTTTTGGC 
TTGGGCAACA GTGCTTCGGC TGGTGGCCGG ACGGGTACGA CTGCTGTATC GCTTGACGCG 
CTGGATGAAG TTCAGTTGAA CGTTGCTCCC TTTGACGTTC GTCAGACGGG TTTCTCGGGT 
GCCAGCATCA ACGCCGTGAC GCGTTCCGGT ACCAACGATT TTTCTGGCTC GGTTTATCAC 
CTGTTCAGAA ATAACAGCTT AGCCGGTAAA AAAGCTGACG GTAAAGATCT GCCACCGGTT 
ACGATTGATC AGAAAACAAC CGGTTTCCGG ATTGGTGGAC CGATCATCAA AAACAAACTG 
TTCTTCTTCG CTAACGTAGA GCAGTTCAAA AGCAGCCAGC CAGCTTTGGA TTGGGTAGTG 
AACCGCGGGG CGGGTACAAC CGGTAACGTA TCTCGGGTAA CGGAAGCTGA TCTGACCGAC 
TTGAATCAAT TCATGCAGTC GAAATTCAAC TACTCGCTGG GTGCTTTTGA TAACTTCAAC 
AATGACGTGA AAAGTACGAA AGGGCTGATT CGTCTGGACT ATAACATCAA CGACAATCAT 
AAACTGTCGG TACGTTACTC ACACCACGAT TCGGAGTCGG GACAGATTAT CAGTAATAGC 
AACAGTAGTA ACACCGCCGG TAATGGTAAC CGGACCAACT CTGCGCTGGC TATCTCCGGC 
GAAAACACGG GCTATATCAT TGCTGACAAC ACCCGGTCTG TTGCTGCTGA GTTAAACTCT 
ACGTTTGGAG GTAAATTTGC TAATAAGCTT GTTGCTACCT ACAATAAGCA AATTGAAGAC 
CGGACTTACA AAACGGGTAT CTTTCCAACG GTTGACATTT TAAAGGACGG AACGACCTAC 
ACGACGGTTG GTTTTGACCC ATTTACACCT AATAACAAGC TAAATTATTC GACACTGAAT 
ATCACGGATA ACTTCAGCTA TTTTGCGGGT AATCACACGC TGACACTTGG GTTATCGTAT 
GAGAAGTTTA CATCGAACAA CGTATTCTTC CCGGCTTCGA ATGGCGTTTA TGTGTATAAC 
TCAATTGCTG ACTTCAAAAC AGCCGCTCAA TATGCATTAG ATAATCCGAA CGCAACAACG 
TCGCCTGTTG CGGTGTCTCG GTATAACTTA CGTTATTCTT TATTGCCAGG TGGTGCAGAG 
CCGTTACAGA CATTGCACCG CAGTACCTAC AGTGCATACG TTCAGGATGA ATTCCAGGTA 
AGGCCAAATT TTAAACTGAC GGCTGGTATC CGGGCTGATC TGTTCGCGTA CGATAACTCG 
ACGGCGGCTG ATTTCAATAA CCCAATTGTT GCCCGCCTTA CGTTTAGGGA TGAGAATAAT 
GCCAATTATG GTGTTAATAC AGGTGCATTC CCCAAAGCAC GTTTGTTGAT TTCGCCCCGC 
GTTGGTTTCA ACTGGGATGT GAAAAATGAT AAAATGACCC AGATACGCGG AGGTAGTGGT 
TTCTTTGTAT CTCGTATTCC AGAAGTTCTG GTGTCTAACC AGCTTGGGAA TAATGGCGTG 
AATACAGCTT TAATTGCTGC TAATAATAGC ACCGCTTATC CATTCGTTAC TGATCCCAGC 
AGATTACCCG CTGCCGTAAG ACCTGATCCA GCCAATGTAA AACTGGAGAA TTTACAACCT 
TACGTTATCA ATGCTACGGA TCCCAACCTG AAGTACCCAC TTGTTTGGAA AACTAACCTG 
GCCATTGACC AACGGTTACC ATGGGGATTA GTTGGAACGC TTGAAGTGAT TTATAACAAG 
ACACTTCAGG GTCTGCGCTA TATCGACGCT AACCTGAAAG CACCGGATCG TACGCTTAGC 
GGTGCTGATA CCCGCGGTCG TTTCCCTGCG TCAGGAGTGG CTAGTTCGGG CACAGGTGCT 
AACAACACGG TTAACATAGC TCGTTTCTAT AACACGGCTA TTACAAATGC CTTTATTCTG 
AAAAACTCGA CTCAGGGTGA TGCGTATACC TTCACCGCTA AACTTGAGAA GCCAACATCG 
AATGGGTTTG GAGGTATGCT CGCCTACACC TATGGTCTGG CCAGAGATTT ACAATCGGTA 
GGTAGCACAG TACAGGCCAA CATCCCAACG GTACAGGGGC AGAATTACCT GGGTCTTTCA 
TTTGCTGACA ACGACCTGCG TCACCGGATC ATTGGTTACG TAAACTATCG GCTGAACTAC 
GGCGGGAAAT TCGGTGGATC GACAACCTTC ACCTTAGGTA CACAGTCGAC CAGCGGTTAC 
AAAGTATCGT ATGTTGTGGG TGGTGATCTG AACGGCGATG GTCAGACAAC AAACGATCTG 
ATTTATGTAC CGAAGACTGC TTCAGAATTG ACATTCGCAC CGTTAACAGT AGGTTCTGGT 
GCTACAGCAC AAACGTTCTC TCCAGAGCAA CAGCAAGCGG CTTTTGACGC TTATATCAAC 
AATAATGAAT ACCTGAAAAC TCGTCGTGGG CAGTATGCTG AGCGTAACGG TGGCTACTCT 
CCCTGGTTAA CGCGGTTTGA TTTTACCGCT ATTCAGGAGT TTTACATCGC AACGGGAGCT 
AAAGGCACAC GCCATACACT CCAGTTCCGG GCCGATATCC TGAACGTTGG TAACCTGCTC 
AACAACAAAT GGGGTGTAGG GTATGCGAAC ACGTCTACAC AGCCATTATC TCTGGTTTCT 
GGCACGCCTA ATGCTGCTGG TGTTCCTTCG TATCGTCTGG GTACACAGAA TGTAAACGGT 
CAGACGGTTC TGCTACAGGA TTCATTTGTG AAAAGTATTA CGATTGATAA CGTTTGGCAG 
GCACAGCTTG GCGTTCGTTA CTCATTCTAA 

 

Protein sequence

MSKNLLQFRL ALVLIGSILM AVLSGNAAIA QVTTSVINGL VTDDKGAALP GATVVAVHEP 
SGSRYGTTTN ASGRYTLPGV RVGGPFRITA TFVGFKDQVT EGVFTNLGTS SDVSFKMADN 
STQLSEIVVS GNQNGIISSN RTGAATSYGR GTINTIPTLG RTIADITKYN AYGNGQSFGG 
QDARFNNITI DGAVFNNGFG LGNSASAGGR TGTTAVSLDA LDEVQLNVAP FDVRQTGFSG 
ASINAVTRSG TNDFSGSVYH LFRNNSLAGK KADGKDLPPV TIDQKTTGFR IGGPIIKNKL 
FFFANVEQFK SSQPALDWVV NRGAGTTGNV SRVTEADLTD LNQFMQSKFN YSLGAFDNFN 
NDVKSTKGLI RLDYNINDNH KLSVRYSHHD SESGQIISNS NSSNTAGNGN RTNSALAISG 
ENTGYIIADN TRSVAAELNS TFGGKFANKL VATYNKQIED RTYKTGIFPT VDILKDGTTY 
TTVGFDPFTP NNKLNYSTLN ITDNFSYFAG NHTLTLGLSY EKFTSNNVFF PASNGVYVYN 
SIADFKTAAQ YALDNPNATT SPVAVSRYNL RYSLLPGGAE PLQTLHRSTY SAYVQDEFQV 
RPNFKLTAGI RADLFAYDNS TAADFNNPIV ARLTFRDENN ANYGVNTGAF PKARLLISPR 
VGFNWDVKND KMTQIRGGSG FFVSRIPEVL VSNQLGNNGV NTALIAANNS TAYPFVTDPS 
RLPAAVRPDP ANVKLENLQP YVINATDPNL KYPLVWKTNL AIDQRLPWGL VGTLEVIYNK 
TLQGLRYIDA NLKAPDRTLS GADTRGRFPA SGVASSGTGA NNTVNIARFY NTAITNAFIL 
KNSTQGDAYT FTAKLEKPTS NGFGGMLAYT YGLARDLQSV GSTVQANIPT VQGQNYLGLS 
FADNDLRHRI IGYVNYRLNY GGKFGGSTTF TLGTQSTSGY KVSYVVGGDL NGDGQTTNDL 
IYVPKTASEL TFAPLTVGSG ATAQTFSPEQ QQAAFDAYIN NNEYLKTRRG QYAERNGGYS 
PWLTRFDFTA IQEFYIATGA KGTRHTLQFR ADILNVGNLL NNKWGVGYAN TSTQPLSLVS 
GTPNAAGVPS YRLGTQNVNG QTVLLQDSFV KSITIDNVWQ AQLGVRYSF