Gene Slin_2996 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_2996 
Symbol 
ID8726747 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp3624935 
End bp3626935 
Gene Length2001 bp 
Protein Length666 aa 
Translation table11 
GC content50% 
IMG OID 
ProductDNA gyrase, B subunit 
Protein accessionYP_003387806 
Protein GI284037876 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.39538 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAACG AACTAATTGA AGCAGACGCT CCCGTTGACA CAACCAAGAG CAACTATGGT 
GCTGATAATA TCCAGGTTTT AGAAGGCCTG GAAGCCGTTC GCAAACGGCC ATCCATGTAC
ATCGGCGACG TAGGTATACG TGGTCTTCAC CACCTCATTT GGGAAGTTGT TGATAACTCC
ATTGACGAAG CGCTGGCGGG CTACTGCGAT AAGATTAGCG TTACAATCAA TCCCGATAAC
TCCATTACGG TACAGGACAA TGGCCGTGGT ATTCCAACGG GCATTAACAC CAAAATGGGC
AAGTCGGCGC TCGAAATTGC CATGACGATC CTACACGCTG GTGGCAAGTT CGATAAAGAC
ACGTATAAAG TTTCCGGAGG TTTGCACGGT GTCGGTGTTT CCTGCGTCAA CGCCCTTTCG
ACCGACGTAC GTGTTGAGGT TCACCGCGAA GGCAAAATCT TCGAGCAGGA GTATAAAATT
GGCGTTCCCC AGTACGATGT CCGCGTCATT GGTGAAGCTA CTGATACGGG TACAACAACG
CATTTCAAGC CAGATGCCAG CATCTTCACC GAAACCGTTT ACAAGTATGA TACCGTTGCC
GGCCGCCTGC GCGAACTGGC TTATTTGAAT AAGGGTATTC ATATCTTCCT CAAGGATATG
CGTGAAGTCG ACGAAACGGG TGAACCTGTT CGTCAGGATG ATTTCTTTTC TGAAGGCGGG
CTGATCGAGT TTGTCGAGTT TCTCGATGAA ACGCGGCCTG CTCTCGATGG AATGAAACCC
ATCTACATGG AAAACACTAA AGGCGCTACG CCCGTACAGG TTGCGCTGGT ATACAACTAC
GAAGCCGGTG AGAACGTCTT ATCGTACGTT AACAACATCA ACACCCACGA AGGTGGTACG
CACGTACAGG GCTTCCGCTC AGCGCTCACA CGGGTGTTAA AAAACTACGC GGATAAAAAT
CCCGGTGTAC TACCCAAAAA TTCGGGTAAA GTAACGTTTA GCGGAGAGGA TTTCCGGAAA
GGCCTTACGG CGGTGATCTC GGTGAAAGTT CAGGAACCTC AGTTTGAAGG GCAGACTAAA
ACAAAGCTTG GTAACCAGGA CGTGGTCAGC GCAGTAAGCC AGACCATGGC CGACCTGCTC
GAAACATGGC TGGAAGAAAA CCCTAAAACC GCTCAGGGCA TTGTTAAGAA AGTCCTTGTT
TCGGCTCAGG CGCGTATTGC GGCTGATCTG GCCTACAAGC GCATCATGAC CGAGCGTAAG
GACTTTATGG GTGGCATGGG CTTGCCCGGT AAACTTGCCG ACTGCTCAGA CACCGACCCG
GAAAAATGTG AATTATACCT TGTAGAGGGT GACTCAGCGG GTGGAACGGC CAAACAGGGC
CGCAACCGGG CGTTTCAGGC AATTTTGCCC CTCCGTGGTA AAATTCTGAA CGTAGAGAAG
GCCATGGAGC ACAAAATCTA CGAAAACGAA GAGATAAAGA ACATCTGGAC AGCCCTGGGT
GTACGTCTTG AGAAAAAGGA TGATGAGACC GTTATGAACC TGGATAAGCT CCGGTATCAT
AAAATCATCA TCATGACCGA TGCTGACGTA GATGGTAGCC ACATCCGTAC CCTCATTTTA
ACGCTGTTCT ACCGCAACAT GAAGGCGTTG ATCGATAATG GCTACATCTA CATTGCCCAG
CCCCCGCTGT ACCTGGTTAA GAAAGGTAAA GAAGAGCGCT ATTGCTGGAC CGAAGCCCAG
CGTGAAGCTG CGGTAAAAGA ACTGGCGGGC AGCGGCCGGG AAGAAAATGT TGGCGTACAA
CGCTACAAAG GGCTTGGTGA AATGAACGCC GAACAACTCT GGAGCACCAC AATGAATCCC
GATACCCGGT CGTTAAAAGT AGTGACCGTT GAGTCGGCGG CTGATGCCGA CCACGTTTTC
TCGACGCTGA TGGGTGACGA AGTTGCCCCC AGACGAGAAT TTATCGAACG AAACGCAAAA
TACGCCCGAG TGGATGTTTA A
 
Protein sequence
MTNELIEADA PVDTTKSNYG ADNIQVLEGL EAVRKRPSMY IGDVGIRGLH HLIWEVVDNS 
IDEALAGYCD KISVTINPDN SITVQDNGRG IPTGINTKMG KSALEIAMTI LHAGGKFDKD
TYKVSGGLHG VGVSCVNALS TDVRVEVHRE GKIFEQEYKI GVPQYDVRVI GEATDTGTTT
HFKPDASIFT ETVYKYDTVA GRLRELAYLN KGIHIFLKDM REVDETGEPV RQDDFFSEGG
LIEFVEFLDE TRPALDGMKP IYMENTKGAT PVQVALVYNY EAGENVLSYV NNINTHEGGT
HVQGFRSALT RVLKNYADKN PGVLPKNSGK VTFSGEDFRK GLTAVISVKV QEPQFEGQTK
TKLGNQDVVS AVSQTMADLL ETWLEENPKT AQGIVKKVLV SAQARIAADL AYKRIMTERK
DFMGGMGLPG KLADCSDTDP EKCELYLVEG DSAGGTAKQG RNRAFQAILP LRGKILNVEK
AMEHKIYENE EIKNIWTALG VRLEKKDDET VMNLDKLRYH KIIIMTDADV DGSHIRTLIL
TLFYRNMKAL IDNGYIYIAQ PPLYLVKKGK EERYCWTEAQ REAAVKELAG SGREENVGVQ
RYKGLGEMNA EQLWSTTMNP DTRSLKVVTV ESAADADHVF STLMGDEVAP RREFIERNAK
YARVDV