Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_2996 |
Symbol | |
ID | 8726747 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 3624935 |
End bp | 3626935 |
Gene Length | 2001 bp |
Protein Length | 666 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | |
Product | DNA gyrase, B subunit |
Protein accession | YP_003387806 |
Protein GI | 284037876 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.39538 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCAACG AACTAATTGA AGCAGACGCT CCCGTTGACA CAACCAAGAG CAACTATGGT GCTGATAATA TCCAGGTTTT AGAAGGCCTG GAAGCCGTTC GCAAACGGCC ATCCATGTAC ATCGGCGACG TAGGTATACG TGGTCTTCAC CACCTCATTT GGGAAGTTGT TGATAACTCC ATTGACGAAG CGCTGGCGGG CTACTGCGAT AAGATTAGCG TTACAATCAA TCCCGATAAC TCCATTACGG TACAGGACAA TGGCCGTGGT ATTCCAACGG GCATTAACAC CAAAATGGGC AAGTCGGCGC TCGAAATTGC CATGACGATC CTACACGCTG GTGGCAAGTT CGATAAAGAC ACGTATAAAG TTTCCGGAGG TTTGCACGGT GTCGGTGTTT CCTGCGTCAA CGCCCTTTCG ACCGACGTAC GTGTTGAGGT TCACCGCGAA GGCAAAATCT TCGAGCAGGA GTATAAAATT GGCGTTCCCC AGTACGATGT CCGCGTCATT GGTGAAGCTA CTGATACGGG TACAACAACG CATTTCAAGC CAGATGCCAG CATCTTCACC GAAACCGTTT ACAAGTATGA TACCGTTGCC GGCCGCCTGC GCGAACTGGC TTATTTGAAT AAGGGTATTC ATATCTTCCT CAAGGATATG CGTGAAGTCG ACGAAACGGG TGAACCTGTT CGTCAGGATG ATTTCTTTTC TGAAGGCGGG CTGATCGAGT TTGTCGAGTT TCTCGATGAA ACGCGGCCTG CTCTCGATGG AATGAAACCC ATCTACATGG AAAACACTAA AGGCGCTACG CCCGTACAGG TTGCGCTGGT ATACAACTAC GAAGCCGGTG AGAACGTCTT ATCGTACGTT AACAACATCA ACACCCACGA AGGTGGTACG CACGTACAGG GCTTCCGCTC AGCGCTCACA CGGGTGTTAA AAAACTACGC GGATAAAAAT CCCGGTGTAC TACCCAAAAA TTCGGGTAAA GTAACGTTTA GCGGAGAGGA TTTCCGGAAA GGCCTTACGG CGGTGATCTC GGTGAAAGTT CAGGAACCTC AGTTTGAAGG GCAGACTAAA ACAAAGCTTG GTAACCAGGA CGTGGTCAGC GCAGTAAGCC AGACCATGGC CGACCTGCTC GAAACATGGC TGGAAGAAAA CCCTAAAACC GCTCAGGGCA TTGTTAAGAA AGTCCTTGTT TCGGCTCAGG CGCGTATTGC GGCTGATCTG GCCTACAAGC GCATCATGAC CGAGCGTAAG GACTTTATGG GTGGCATGGG CTTGCCCGGT AAACTTGCCG ACTGCTCAGA CACCGACCCG GAAAAATGTG AATTATACCT TGTAGAGGGT GACTCAGCGG GTGGAACGGC CAAACAGGGC CGCAACCGGG CGTTTCAGGC AATTTTGCCC CTCCGTGGTA AAATTCTGAA CGTAGAGAAG GCCATGGAGC ACAAAATCTA CGAAAACGAA GAGATAAAGA ACATCTGGAC AGCCCTGGGT GTACGTCTTG AGAAAAAGGA TGATGAGACC GTTATGAACC TGGATAAGCT CCGGTATCAT AAAATCATCA TCATGACCGA TGCTGACGTA GATGGTAGCC ACATCCGTAC CCTCATTTTA ACGCTGTTCT ACCGCAACAT GAAGGCGTTG ATCGATAATG GCTACATCTA CATTGCCCAG CCCCCGCTGT ACCTGGTTAA GAAAGGTAAA GAAGAGCGCT ATTGCTGGAC CGAAGCCCAG CGTGAAGCTG CGGTAAAAGA ACTGGCGGGC AGCGGCCGGG AAGAAAATGT TGGCGTACAA CGCTACAAAG GGCTTGGTGA AATGAACGCC GAACAACTCT GGAGCACCAC AATGAATCCC GATACCCGGT CGTTAAAAGT AGTGACCGTT GAGTCGGCGG CTGATGCCGA CCACGTTTTC TCGACGCTGA TGGGTGACGA AGTTGCCCCC AGACGAGAAT TTATCGAACG AAACGCAAAA TACGCCCGAG TGGATGTTTA A
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Protein sequence | MTNELIEADA PVDTTKSNYG ADNIQVLEGL EAVRKRPSMY IGDVGIRGLH HLIWEVVDNS IDEALAGYCD KISVTINPDN SITVQDNGRG IPTGINTKMG KSALEIAMTI LHAGGKFDKD TYKVSGGLHG VGVSCVNALS TDVRVEVHRE GKIFEQEYKI GVPQYDVRVI GEATDTGTTT HFKPDASIFT ETVYKYDTVA GRLRELAYLN KGIHIFLKDM REVDETGEPV RQDDFFSEGG LIEFVEFLDE TRPALDGMKP IYMENTKGAT PVQVALVYNY EAGENVLSYV NNINTHEGGT HVQGFRSALT RVLKNYADKN PGVLPKNSGK VTFSGEDFRK GLTAVISVKV QEPQFEGQTK TKLGNQDVVS AVSQTMADLL ETWLEENPKT AQGIVKKVLV SAQARIAADL AYKRIMTERK DFMGGMGLPG KLADCSDTDP EKCELYLVEG DSAGGTAKQG RNRAFQAILP LRGKILNVEK AMEHKIYENE EIKNIWTALG VRLEKKDDET VMNLDKLRYH KIIIMTDADV DGSHIRTLIL TLFYRNMKAL IDNGYIYIAQ PPLYLVKKGK EERYCWTEAQ REAAVKELAG SGREENVGVQ RYKGLGEMNA EQLWSTTMNP DTRSLKVVTV ESAADADHVF STLMGDEVAP RREFIERNAK YARVDV
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