Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_2953 |
Symbol | |
ID | 8726704 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 3567329 |
End bp | 3568063 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | |
Product | glycosyl transferase family 2 |
Protein accession | YP_003387764 |
Protein GI | 284037834 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.549446 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCATCTG TCTGTATCAT TGTCCCCTGT TATAACGAAG CCACCCGGCT CCCCGTCGAT GTGTTCCTTT CGTATATTCG GCAGACAGAG AATGTAAACT TTTGCTTCGT CGACGACGGC AGCAGCGACG CCACCCGAAC GGTGCTGGAG ACGATGAAGG CTCGGTATCC TGACTGCATT GATGCGTTAA TCCTGCCCCA GAATCAGGGG AAAGCGGGTG CGGTGCGGGC TGGTATGCTG CATTGCGCCA GCCGGTCGTT CGATTATCTG GGTTTTCTGG ATGCAGACTT GGCCACGCCT TTAACGGCCA TTACCGACTT AGCTGCCGTT CTGGATGGCA ACCCGGCGCT GGACATGGTG ATGGGGTCGC GTATAAAATT TCTGGGTGTA GACATTCGGC GCGACCCATT TCGGCATTAT GTTGGCCGCG TTATTGCAAC AATCATCAGT AATATTCTGA AGTTACCCGT TTACGACTCA CAGTGCGGAG CCAAGTTGTT CAGGCGCACC ACCATGACCG GGTTGTTTGA GGAGTCGTTC ATAAGTCCCT GGCTGTTTGA CGTCGAACTG CTGGCCCGGC TTATCCGGAA GCACGGTCGC CCCGAGGTGC TGGACCATGT AGCCGAATAC CCACTCCGGC AATGGATTGA GCAAAGCGAT TCACGGATCA GCTCCGGTTA TGTTTTCAAA ATGTGGTACG AGTTGTTCCG AATTTACCAG ACCTATCGAA CGTAG
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Protein sequence | MSSVCIIVPC YNEATRLPVD VFLSYIRQTE NVNFCFVDDG SSDATRTVLE TMKARYPDCI DALILPQNQG KAGAVRAGML HCASRSFDYL GFLDADLATP LTAITDLAAV LDGNPALDMV MGSRIKFLGV DIRRDPFRHY VGRVIATIIS NILKLPVYDS QCGAKLFRRT TMTGLFEESF ISPWLFDVEL LARLIRKHGR PEVLDHVAEY PLRQWIEQSD SRISSGYVFK MWYELFRIYQ TYRT
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