Gene Slin_2953 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_2953 
Symbol 
ID8726704 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp3567329 
End bp3568063 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content53% 
IMG OID 
Productglycosyl transferase family 2 
Protein accessionYP_003387764 
Protein GI284037834 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.549446 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCATCTG TCTGTATCAT TGTCCCCTGT TATAACGAAG CCACCCGGCT CCCCGTCGAT 
GTGTTCCTTT CGTATATTCG GCAGACAGAG AATGTAAACT TTTGCTTCGT CGACGACGGC
AGCAGCGACG CCACCCGAAC GGTGCTGGAG ACGATGAAGG CTCGGTATCC TGACTGCATT
GATGCGTTAA TCCTGCCCCA GAATCAGGGG AAAGCGGGTG CGGTGCGGGC TGGTATGCTG
CATTGCGCCA GCCGGTCGTT CGATTATCTG GGTTTTCTGG ATGCAGACTT GGCCACGCCT
TTAACGGCCA TTACCGACTT AGCTGCCGTT CTGGATGGCA ACCCGGCGCT GGACATGGTG
ATGGGGTCGC GTATAAAATT TCTGGGTGTA GACATTCGGC GCGACCCATT TCGGCATTAT
GTTGGCCGCG TTATTGCAAC AATCATCAGT AATATTCTGA AGTTACCCGT TTACGACTCA
CAGTGCGGAG CCAAGTTGTT CAGGCGCACC ACCATGACCG GGTTGTTTGA GGAGTCGTTC
ATAAGTCCCT GGCTGTTTGA CGTCGAACTG CTGGCCCGGC TTATCCGGAA GCACGGTCGC
CCCGAGGTGC TGGACCATGT AGCCGAATAC CCACTCCGGC AATGGATTGA GCAAAGCGAT
TCACGGATCA GCTCCGGTTA TGTTTTCAAA ATGTGGTACG AGTTGTTCCG AATTTACCAG
ACCTATCGAA CGTAG
 
Protein sequence
MSSVCIIVPC YNEATRLPVD VFLSYIRQTE NVNFCFVDDG SSDATRTVLE TMKARYPDCI 
DALILPQNQG KAGAVRAGML HCASRSFDYL GFLDADLATP LTAITDLAAV LDGNPALDMV
MGSRIKFLGV DIRRDPFRHY VGRVIATIIS NILKLPVYDS QCGAKLFRRT TMTGLFEESF
ISPWLFDVEL LARLIRKHGR PEVLDHVAEY PLRQWIEQSD SRISSGYVFK MWYELFRIYQ
TYRT