Gene Slin_2938 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_2938 
Symbol 
ID8726689 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp3550457 
End bp3551305 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content53% 
IMG OID 
Productmodification methylase, HemK family 
Protein accessionYP_003387749 
Protein GI284037819 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.557385 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAACTG CCAAACCCTT ATACGAACGG CTCAGCAAGA ATATTACCGC CTATCCACCC 
GAAGAAGCGC GGGAAATGGC CTTTATGCTG CTCGACCATT ATTTCGGCCT GCGTAAGACC
GACGTATTAA CCGACAAACC CCTGCCCCCC AATCGCACCG AGCCCGACTG GTTCAAGATT
CTGGAACGGC TTAACCGGCA GGAACCCATT CAGCACGTTA TTGGCACGAC GATCTTCTGC
GGGCTGGAGT TCGAGGTATC GCCCGATGTG CTGATACCCC GCCCCGAAAC CGAAGACCTG
GTCCGGCTGA TCATGCACGA CTTTGCCGAC CGGGTCGATG ATGTTCCCAT TCTGGATATT
GGTACCGGCA GCGGCTGTAT TGCCATTACG ATGGCCCGCT TCCTGCCCCA GTCGGTGGTA
ACAGGCTGGG ATGTTTCGGA AAAAGCCCTC ACACTGGCGC GGCAAAATGC CGAACACCTG
AAAGCTGATG TACAGTTTTC AATTCAGGAT ATATTAAATG TTCCGGCCGA CTTTAATGAG
CGGTTCGACT GTGTGGTGAG CAATCCACCG TATGTAACAC GTTCGGAAGC CGCCGAAATG
GACCGGAATG TACTCGATTA CGAACCCGAT CTGGCGCTGT TTGTTGAGGA CAATGACCCG
CTGGTCTTTT ACAAGGCTGT AGCTGATTTC TGCGTTCGTC ACCTTACCAA AGACGGTGCC
TGTTACGTAG AGATAAACGA ACGCTTTGGC GAAGCAACAC GTCAGGTGTT CGCCGACCGG
GGTTTCACAA AGATTCAGGT ATACAAAGAC ATTCACGGCA AAGACCGCAG CATCCGGGCA
ACGTTTTAA
 
Protein sequence
MATAKPLYER LSKNITAYPP EEAREMAFML LDHYFGLRKT DVLTDKPLPP NRTEPDWFKI 
LERLNRQEPI QHVIGTTIFC GLEFEVSPDV LIPRPETEDL VRLIMHDFAD RVDDVPILDI
GTGSGCIAIT MARFLPQSVV TGWDVSEKAL TLARQNAEHL KADVQFSIQD ILNVPADFNE
RFDCVVSNPP YVTRSEAAEM DRNVLDYEPD LALFVEDNDP LVFYKAVADF CVRHLTKDGA
CYVEINERFG EATRQVFADR GFTKIQVYKD IHGKDRSIRA TF