Gene Slin_2823 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_2823 
Symbol 
ID8726573 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp3416765 
End bp3417622 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content52% 
IMG OID 
Producttranscriptional regulator, AraC family 
Protein accessionYP_003387636 
Protein GI284037706 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTTGGA TTACCCGCGA ACGGCCGAAA ATTGACCGAC TAGCCTGTCC GTGGCTCATC 
CGGCGATTCA TCGACCCAAC GGCCGACATT CGGTTTGTAC CCGAATCGCA GGTTCTTGCC
CAGGCCAGGG AGCTGGATGC TGTTCCTTTC GACATCCCGG ATGTAGAATA CAGCCACTAC
GAAGACCGGT GCACGTTTGA TTATTTCCTG CAAAAGCATA AACTCGATGA TCCGGCGCTG
CACCGCATTG CCGCCATCGT ACGGGGTGCC GACACCGACG ATCATACACT AGCACCCGAA
GCGGCTGGTT TGTGGGCCAT TTCGGCGGGG TTAGCGTTCA ACATCAGTAA CGATCAGCAG
CTACTCGACC AGGGGCTGCT CATTTACGAC GCCCTCTACA GCTGGGCCAA ACACCTACAG
ACGGTCAAAC ACACCCAAAG CCCGACAGAG CGACTTCTGC TGGGGGTTCT GCACACTTAC
CAGGCCGCAC CGGGCAAACG GAAGACGCCA GTCTGGGTAA AGGAGTTAAA GGAACTGATT
CAGGATCAAA TAGATACCAA TCTGACGCTC AGTCTCAATG AGCTATCTGA AAGTTTAGCG
GTCAATCCGG CCTACGTGTC GCGGGCCTTT TCGCGCTACT TCGATGATCT GTCATTTGGC
GAATACATCC GTAAACTACG CATCGAGAAA GCCCTCTTTC TGCTCGAAAC CACCAGCTAC
AGCCTTTCCG AAATTGCTTA CCTGACGGGC TTCTCCGATC AAAGCCACTT TAGCCGGATA
TTCAAGAAAC TGATTGGCAA AAACCCGTCT GACTACCGAA AAAATCAGCG AAAAGGTAAA
CCAGATACAA AAGGTTAA
 
Protein sequence
MIWITRERPK IDRLACPWLI RRFIDPTADI RFVPESQVLA QARELDAVPF DIPDVEYSHY 
EDRCTFDYFL QKHKLDDPAL HRIAAIVRGA DTDDHTLAPE AAGLWAISAG LAFNISNDQQ
LLDQGLLIYD ALYSWAKHLQ TVKHTQSPTE RLLLGVLHTY QAAPGKRKTP VWVKELKELI
QDQIDTNLTL SLNELSESLA VNPAYVSRAF SRYFDDLSFG EYIRKLRIEK ALFLLETTSY
SLSEIAYLTG FSDQSHFSRI FKKLIGKNPS DYRKNQRKGK PDTKG