Gene Slin_2738 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_2738 
Symbol 
ID8726488 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp3311281 
End bp3312006 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content47% 
IMG OID 
ProductOmpA/MotB domain protein 
Protein accessionYP_003387552 
Protein GI284037622 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00260572 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0000108242 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCGCGCCG TACTGTTACC TCTTTTTTGC CTGCTCTCGT TTTCATCCCT TTTCGCACAG 
GTCAAACTGC CCGTTAAAAC GCAGAAAACT CTGTTCAGCA TTTCGGCAGT TGACGATAAA
ACATCAGCAG AAGTACCGGC TCAGTTTACT ATACAGGCCA TGCAGGCTAA AAAGAAATTC
ATTGGAAAAA GCGTCCCCGT TAAGCCATTT GAGTTCATTT TAACCCGCAC CGATACACTG
AACGTTATTG CCAGTGCGCC CGGCTATTAC GAAGCCGAAG AATTAATGGT CGTTTCCTGC
GATACCTGCG CCACGTATGG CTACGTGATC CGGCTTGAGA AAGAGGAAAA AGCCGATAGT
GTCTTTCGGG ATTTGCAGGT CAACCAGGCC TTTCGGCTCG ACAATGTCTA TTTCGATCAA
AGCAGCTATG TCCTTCGGCC GGAATCGTAT CCGCAACTCA ATAAACTGAT AAAGACATTG
GTGACTATAC CAAAGCTGGT CATCGAAATT GCCGGGCATA CCGACAATGT GGGCGATAAA
CGACTAAACC AGGCCTTGTC GGAGAACCGC GCCAAGATTA TTACGAACTA CCTCGTCACG
AATGGCATTC CTGAAAATCG TCTGCGTCAC AATGGCTACG GCAGTAGTAA ACCAGCCGCT
CCGAACGACA CGGAAGAAAA TAAACGAAAG AACCGACGCG TTGAATTTGT TGTATTAGCT
ATGTAG
 
Protein sequence
MRAVLLPLFC LLSFSSLFAQ VKLPVKTQKT LFSISAVDDK TSAEVPAQFT IQAMQAKKKF 
IGKSVPVKPF EFILTRTDTL NVIASAPGYY EAEELMVVSC DTCATYGYVI RLEKEEKADS
VFRDLQVNQA FRLDNVYFDQ SSYVLRPESY PQLNKLIKTL VTIPKLVIEI AGHTDNVGDK
RLNQALSENR AKIITNYLVT NGIPENRLRH NGYGSSKPAA PNDTEENKRK NRRVEFVVLA
M