Gene Slin_2731 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_2731 
Symbol 
ID8726481 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp3303058 
End bp3303945 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content55% 
IMG OID 
Productcyanophycinase 
Protein accessionYP_003387545 
Protein GI284037615 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.00189714 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAAAAGC AATTCGTACT ACCACTTCTT ATCCTGACCC TATTTGCCGG GCGTCTTGCG 
GCCCAAACAT CACAAACCAT TGGTCCCGAA AAAGGGGCGC TGGTTATTGT AGGGGGCGGA
GCCATGAGCA ACGACCTCTG GAACCGGTTT ATCGAACTGG CCGGTGGTCC AGCCGCAGCT
AACATCGTGA TTATTCCTAC AGCTGGCGAA GATTCGTCAG CCAGCAGTGC CCCGCGCGAA
AAGGAGAAGC TAACGAGTCT GGGGGTTAAG AACATCACCA TCCTGCACAC CCGCGACCCA
AAAGTGGCGA ATCAGGAGTC GTTTGTAGCA CCCATTCGTA AGGCTACCGG GGTATGGTTT
GTGGGTGGTC GGCACTGGCG CCTGACGGAT TCGTACCTGA ACACACTGGC GCATAAAGAA
TTCAACGCCG TGCTGAGTCG GGGTGGGGTC ATTGGCGGCA CGTCGGCCGG GGCGACCATT
CAGGGCTCGT TCATGGTTCG GGGCGACACC AAAGGCAACT CGATCATGGT GGGCGACCAT
ACCCAAGGCC TCGACTTCAT TCACAACGTC ACCATCGACC AGCATTTTCT GCGTCGGAAT
CGCCAGTTCG ATCTGGTTGA GGTCATCAAA GCCCGACCCG AGTTACTGGG CATTGCCATC
GACGAAGGAA CTGCCATTGT CGTGCAGCAG AACACTTTTG AGGTGATCGG CAACTCCTAC
GTGGGCATTT ACGAAGCCAA CCAGATTGCC AACAGCGCGA AATACCCATC GGGTCAGAAC
AGCACGGGTG GCCCGTTCTA TTTCATCAGC AAAGGACAGA AGTTCGACCT AAAAGCGCGT
AAAGTAATCA GCCCACAACC CCAACGGCCC AACGAACCGG CGAAGTAA
 
Protein sequence
MKKQFVLPLL ILTLFAGRLA AQTSQTIGPE KGALVIVGGG AMSNDLWNRF IELAGGPAAA 
NIVIIPTAGE DSSASSAPRE KEKLTSLGVK NITILHTRDP KVANQESFVA PIRKATGVWF
VGGRHWRLTD SYLNTLAHKE FNAVLSRGGV IGGTSAGATI QGSFMVRGDT KGNSIMVGDH
TQGLDFIHNV TIDQHFLRRN RQFDLVEVIK ARPELLGIAI DEGTAIVVQQ NTFEVIGNSY
VGIYEANQIA NSAKYPSGQN STGGPFYFIS KGQKFDLKAR KVISPQPQRP NEPAK