Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_2666 |
Symbol | |
ID | 8726414 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 3228542 |
End bp | 3229297 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | |
Product | two component transcriptional regulator, AraC family |
Protein accession | YP_003387481 |
Protein GI | 284037551 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.21287 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.224489 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCAAACA TACTTTTGAT TGAGGATGAT CTTTCGCTTC AATTGACACT CAAAACTATA CTCGAACTGT ATGGTCATAG AATAGCCGTG GCTGATAATG GAAAACGTGC GCTTAGCTTA TTGCGTTATT CCACCCCGGA TTTGATAATT TCTGACATCA TAATGCCGAG AATGGACGGG TACACATTTC TTGAGAGATT AAAGGAGGGT TTGCCTTACA AAAAAATTCC TGTCATTTTC TTAACATCAA AAGACTCACA GGAGGATCGT TCAAAGGGCT TAGAGATGGG AGTGATAAGC TACTTGACAA AGCCAGTAGC CAAAGACGAA ATTATAAGTC AGATCAATAA CCTGATAGCC TACAGAAATT CAATTATCAA TCGTACCATA TACGAAGCTC ATGAGGACCA ACAACCGGAT TTTCAGTTTG TAAAGCAATT TTATGATTTA TTAACTGATA TGGCAGTTAA TTCAGATTTC AGCATTGAAA AAGCGGCCCT GAATTTATTC ATGAGTACAT CTACATTGAA ACGTAGGTTA AAAAACTATC TTGATTCGAA CTTCAGCGAT CTTGTAAAAG AGTTTAGACT AAAAAAAGCT GATAATCTCT TGCTGAACAG CGATTATTCA CTAGAGCAAA TTTCAGTGCT ATGTGGCTTT AGTAGCTTGT CGTACTTCTC AAGAAGTTTC AAGGCGTCCT ATAAGATTAA TCCTAATCAG TATAGGCATA GAAGGGATAT AGGTCAATCT AACTAG
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Protein sequence | MANILLIEDD LSLQLTLKTI LELYGHRIAV ADNGKRALSL LRYSTPDLII SDIIMPRMDG YTFLERLKEG LPYKKIPVIF LTSKDSQEDR SKGLEMGVIS YLTKPVAKDE IISQINNLIA YRNSIINRTI YEAHEDQQPD FQFVKQFYDL LTDMAVNSDF SIEKAALNLF MSTSTLKRRL KNYLDSNFSD LVKEFRLKKA DNLLLNSDYS LEQISVLCGF SSLSYFSRSF KASYKINPNQ YRHRRDIGQS N
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