Gene Slin_2505 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_2505 
Symbol 
ID8726249 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp3025147 
End bp3025686 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content49% 
IMG OID 
ProductYceI family protein 
Protein accessionYP_003387322 
Protein GI284037392 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.0958427 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACAGG AACAAAAAAA ATGGTTTTTT GAACCCGCTC ATTGCAAAAT CGGCTTTGCC 
GTTAGCCACT TTGGCATCAC CGAAACAGAA GGCCATTTCC GACAATTTGA TGGTAGCGTG
GAGGCACAGG CCGACGATTT TTCGGACGCT CAGGTTACCA TGCATATTGA CGTCAGCAGC
GTTGATACCC TCGACAAACA ACGCGACGGC CATCTTCTCT CGGCCGATTT CTTCCATGCC
GAGAAGCACC CAACCATGAC GTTTGTCAGT ACCGGTATGC GTCCGATGGC CACGAATACC
TATAAAATGG ACGGAACGTT AACCTTACTT GGCATTAGCA AGCCGGTTGA GCTGGATGTA
GAATTTCGGG GTATTGTGCC CAAAGACCCC TTTGGCAATA CCAAAGCGGG TTTCAAGGCC
ACAGGCACCA TCAATCGGAA AGACTGGGGC ATGACGTGGA ATAACATCCT GGATTTTGGT
GGTCTGGCCG TTGGCGAAGA GGTGAAAATC AACTGTCAAA TTGAATTGCT GAAGCAGTAA
 
Protein sequence
MTQEQKKWFF EPAHCKIGFA VSHFGITETE GHFRQFDGSV EAQADDFSDA QVTMHIDVSS 
VDTLDKQRDG HLLSADFFHA EKHPTMTFVS TGMRPMATNT YKMDGTLTLL GISKPVELDV
EFRGIVPKDP FGNTKAGFKA TGTINRKDWG MTWNNILDFG GLAVGEEVKI NCQIELLKQ