Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_2482 |
Symbol | |
ID | 8726226 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 3005435 |
End bp | 3006199 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | |
Product | HpcH/HpaI aldolase |
Protein accession | YP_003387300 |
Protein GI | 284037370 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.244891 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAGCAAA ATATCGTTAA AACCCGGCTT AAAAACGGCC AGCCCGTTCT GGGTGTTCTG TCCAATAGCA GCGATCCAAC CGTTGCTGAA CTTTGTGGCT TTTCGGGGCT GGATTTTTAC ATGATCGATG GTGAACATAG TCCCGTCACA ACGGCTCAGG TTCAGGACAT CGTACGTGCC TGTGAGCTAA CCGGTATTAC GCCCCTGGCT CGTGTTCGCA GCAACGACCA AAAGCTGATT TTACAGTTTC TGGATGCGGG CGTCATGGGC ATTATGATGC CCGCCATTAG TACCGTTGCC GATGCCGAAG CATTGGTGCA GGCCGTAAAA TACCCACCGC TGGGCACTCG TGGTTTCGGA CCTGTGCGGG CCAACGATTA TTTGCTGGGC ACTATGAACC AGGGGGAAGC CGTTGCGTTT GCCAACGAAC AGATTCTGAT TTTGCCCCAG CTGGAAGATA AAGAAGCCAT CGACAATCTG GATGATCTGT TGACTGTGGA AGGCATTGAT GGCTTCGTGA TCGGACCCCG CGATCTGGCT ATGAGTATGG GTTATTACGA TGGTCCGGGC CATGACGAAG TAAAGCGAAC CATTGCTGGT GTCGTGGAGA AAATCAGAAA GGCTGGTCTG ATTGCCGGAA CCACAGCCGC TACCGGCGAC CAGGCCAGAG CATTGATCGA CCGGGGCGTT TTATTCTGTC TGAACTCCTT TGCCGGTTTG CTCAAATCGG CCGCCGGCGA TTTTATGAAA GGAAGGGCGG CCTGA
|
Protein sequence | MKQNIVKTRL KNGQPVLGVL SNSSDPTVAE LCGFSGLDFY MIDGEHSPVT TAQVQDIVRA CELTGITPLA RVRSNDQKLI LQFLDAGVMG IMMPAISTVA DAEALVQAVK YPPLGTRGFG PVRANDYLLG TMNQGEAVAF ANEQILILPQ LEDKEAIDNL DDLLTVEGID GFVIGPRDLA MSMGYYDGPG HDEVKRTIAG VVEKIRKAGL IAGTTAATGD QARALIDRGV LFCLNSFAGL LKSAAGDFMK GRAA
|
| |