Gene Slin_2482 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_2482 
Symbol 
ID8726226 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp3005435 
End bp3006199 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content53% 
IMG OID 
ProductHpcH/HpaI aldolase 
Protein accessionYP_003387300 
Protein GI284037370 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.244891 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCAAA ATATCGTTAA AACCCGGCTT AAAAACGGCC AGCCCGTTCT GGGTGTTCTG 
TCCAATAGCA GCGATCCAAC CGTTGCTGAA CTTTGTGGCT TTTCGGGGCT GGATTTTTAC
ATGATCGATG GTGAACATAG TCCCGTCACA ACGGCTCAGG TTCAGGACAT CGTACGTGCC
TGTGAGCTAA CCGGTATTAC GCCCCTGGCT CGTGTTCGCA GCAACGACCA AAAGCTGATT
TTACAGTTTC TGGATGCGGG CGTCATGGGC ATTATGATGC CCGCCATTAG TACCGTTGCC
GATGCCGAAG CATTGGTGCA GGCCGTAAAA TACCCACCGC TGGGCACTCG TGGTTTCGGA
CCTGTGCGGG CCAACGATTA TTTGCTGGGC ACTATGAACC AGGGGGAAGC CGTTGCGTTT
GCCAACGAAC AGATTCTGAT TTTGCCCCAG CTGGAAGATA AAGAAGCCAT CGACAATCTG
GATGATCTGT TGACTGTGGA AGGCATTGAT GGCTTCGTGA TCGGACCCCG CGATCTGGCT
ATGAGTATGG GTTATTACGA TGGTCCGGGC CATGACGAAG TAAAGCGAAC CATTGCTGGT
GTCGTGGAGA AAATCAGAAA GGCTGGTCTG ATTGCCGGAA CCACAGCCGC TACCGGCGAC
CAGGCCAGAG CATTGATCGA CCGGGGCGTT TTATTCTGTC TGAACTCCTT TGCCGGTTTG
CTCAAATCGG CCGCCGGCGA TTTTATGAAA GGAAGGGCGG CCTGA
 
Protein sequence
MKQNIVKTRL KNGQPVLGVL SNSSDPTVAE LCGFSGLDFY MIDGEHSPVT TAQVQDIVRA 
CELTGITPLA RVRSNDQKLI LQFLDAGVMG IMMPAISTVA DAEALVQAVK YPPLGTRGFG
PVRANDYLLG TMNQGEAVAF ANEQILILPQ LEDKEAIDNL DDLLTVEGID GFVIGPRDLA
MSMGYYDGPG HDEVKRTIAG VVEKIRKAGL IAGTTAATGD QARALIDRGV LFCLNSFAGL
LKSAAGDFMK GRAA