Gene Slin_2479 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_2479 
Symbol 
ID8726223 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp3003888 
End bp3004490 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content48% 
IMG OID 
Productnitrogen-fixing NifU domain protein 
Protein accessionYP_003387297 
Protein GI284037367 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.40084 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.245689 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCCTA CGCTAGACCG TCCCGTATCC ATCTTTACGG AAGGAAGCCC CAATCCGAAC 
TCTATGAAGT TCGTCGTTAA CTTTGAACTT GTACCAACTG GCCTTTCCTT TGACTATGCC
ACACCGGGCG ATGCCCTGCT CGATGGAAAA GCATCGCCTT TGGCTGTTGC GCTGTTCGGA
TTTGAGTTTG TTCGGCGGGT GTTTATTTCG GCCAACTTCG TAACCGTAAC AAAGGACGAC
GAAACCGATT GGGATGAGGT ATTGCTTGAA GTGAAGCTCT TTCTGAAAGA TTATTTTGGC
GAGCAGAAAC CCGTTTTCTC GCAGCGGACC GTAGATACAA ATACGACGAA GCTGGATATG
GATTCTGAAA CCGTTCAGAA AATTAAGGCT GTGCTGGAAC AGTATATCAA GCCTGCCGTA
GAATCGGATG GGGGAGCCAT TAGTTTTTAC TCGTTCGACG AACCCAGCGG TACTGTAAAA
GTGCTGTTGC AAGGGTCTTG CAGCGGTTGC CCATCGTCTA CATTGACCTT GAAGGCGGGT
ATCGAGAATT TATTGACCCG CTTAGTGCCT GAAGTAAAGC TGGTTGAGGC CGAAGGTGTA
TAA
 
Protein sequence
MNPTLDRPVS IFTEGSPNPN SMKFVVNFEL VPTGLSFDYA TPGDALLDGK ASPLAVALFG 
FEFVRRVFIS ANFVTVTKDD ETDWDEVLLE VKLFLKDYFG EQKPVFSQRT VDTNTTKLDM
DSETVQKIKA VLEQYIKPAV ESDGGAISFY SFDEPSGTVK VLLQGSCSGC PSSTLTLKAG
IENLLTRLVP EVKLVEAEGV