Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_2479 |
Symbol | |
ID | 8726223 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 3003888 |
End bp | 3004490 |
Gene Length | 603 bp |
Protein Length | 200 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | |
Product | nitrogen-fixing NifU domain protein |
Protein accession | YP_003387297 |
Protein GI | 284037367 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.40084 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.245689 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCCTA CGCTAGACCG TCCCGTATCC ATCTTTACGG AAGGAAGCCC CAATCCGAAC TCTATGAAGT TCGTCGTTAA CTTTGAACTT GTACCAACTG GCCTTTCCTT TGACTATGCC ACACCGGGCG ATGCCCTGCT CGATGGAAAA GCATCGCCTT TGGCTGTTGC GCTGTTCGGA TTTGAGTTTG TTCGGCGGGT GTTTATTTCG GCCAACTTCG TAACCGTAAC AAAGGACGAC GAAACCGATT GGGATGAGGT ATTGCTTGAA GTGAAGCTCT TTCTGAAAGA TTATTTTGGC GAGCAGAAAC CCGTTTTCTC GCAGCGGACC GTAGATACAA ATACGACGAA GCTGGATATG GATTCTGAAA CCGTTCAGAA AATTAAGGCT GTGCTGGAAC AGTATATCAA GCCTGCCGTA GAATCGGATG GGGGAGCCAT TAGTTTTTAC TCGTTCGACG AACCCAGCGG TACTGTAAAA GTGCTGTTGC AAGGGTCTTG CAGCGGTTGC CCATCGTCTA CATTGACCTT GAAGGCGGGT ATCGAGAATT TATTGACCCG CTTAGTGCCT GAAGTAAAGC TGGTTGAGGC CGAAGGTGTA TAA
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Protein sequence | MNPTLDRPVS IFTEGSPNPN SMKFVVNFEL VPTGLSFDYA TPGDALLDGK ASPLAVALFG FEFVRRVFIS ANFVTVTKDD ETDWDEVLLE VKLFLKDYFG EQKPVFSQRT VDTNTTKLDM DSETVQKIKA VLEQYIKPAV ESDGGAISFY SFDEPSGTVK VLLQGSCSGC PSSTLTLKAG IENLLTRLVP EVKLVEAEGV
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