Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_2461 |
Symbol | |
ID | 8726205 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 2971445 |
End bp | 2972314 |
Gene Length | 870 bp |
Protein Length | 289 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | |
Product | glycosyl transferase family 2 |
Protein accession | YP_003387279 |
Protein GI | 284037349 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0660635 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 0.806604 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTCAAAC CGTATTTAGT TCGCCTTTTT CGATGGGTGC AACGCATTAG TAATTTGTTA ACTGGAAAGC CTCCTCTGGT TACGGTAGTC ATCACCTGCT ACAACCACGG GCAGTTTCTG GCCGATGCAA TCGACAGCGT TGTTCAGCAA ACATGGAGTC CTTTCAGTAA GCTGGCTCAA ATGGTAAAGC CCATTGAAAT TATTGTTGTG GACGATGGCT CAACGGATAA CACCCGTGAG GTGTCGGCCC GGTACCGAAA CGTTAAGTAT ATCTATCAGG AAAATCAGGG ATTATCTGCT GCGCGCAATA CAGGGACCAA GGCCAGCAAG GGTGATTTTG TGATCTTTCT GGATGCCGAC GACTGGCTGT ACCCTGCCTG TATCGATATT GGTGCCAACC TGATGATCCA TAATCCAGCC CTTGCTTTTG TATCGGGCGG GCACGATAAG GTGACGATAA ACAAGGAGTT ATTGTCGTCT GAAGCTCGTA ACATTAACGA CCATCATTAC CTACGATTGC TCGAAGGCAA TTACATTGGC ATGCACGCAA CGGTCATGTA CCGGCGTACC GTTCTGAACG CTTATGCTTT TGATACATCC CTGAAAGCCT GCGAAGATTA CGATATGTAT TTACGGATAG CCCGTACCTA CCCCGTACTT CACCACACGA ATAAGGTGGC GGCTTACCGG ATACTTCCCA AAAGTATGTC GGCTAGTAAT ACCAAGATGC TCACTGCCGT GTTAAGTGTG CTGGGACGGC AACAGGAATT ACTAAAAGAT GAATCGGAAA AAGAGGCTTA TCAGCGGGGG CAGCAAATCT GGAAGGATTA TTACGAAAGT CAGATTGACC GGTTACCGGA AAAGCCTTAA
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Protein sequence | MVKPYLVRLF RWVQRISNLL TGKPPLVTVV ITCYNHGQFL ADAIDSVVQQ TWSPFSKLAQ MVKPIEIIVV DDGSTDNTRE VSARYRNVKY IYQENQGLSA ARNTGTKASK GDFVIFLDAD DWLYPACIDI GANLMIHNPA LAFVSGGHDK VTINKELLSS EARNINDHHY LRLLEGNYIG MHATVMYRRT VLNAYAFDTS LKACEDYDMY LRIARTYPVL HHTNKVAAYR ILPKSMSASN TKMLTAVLSV LGRQQELLKD ESEKEAYQRG QQIWKDYYES QIDRLPEKP
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