Gene Slin_2461 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_2461 
Symbol 
ID8726205 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp2971445 
End bp2972314 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content47% 
IMG OID 
Productglycosyl transferase family 2 
Protein accessionYP_003387279 
Protein GI284037349 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0660635 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.806604 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCAAAC CGTATTTAGT TCGCCTTTTT CGATGGGTGC AACGCATTAG TAATTTGTTA 
ACTGGAAAGC CTCCTCTGGT TACGGTAGTC ATCACCTGCT ACAACCACGG GCAGTTTCTG
GCCGATGCAA TCGACAGCGT TGTTCAGCAA ACATGGAGTC CTTTCAGTAA GCTGGCTCAA
ATGGTAAAGC CCATTGAAAT TATTGTTGTG GACGATGGCT CAACGGATAA CACCCGTGAG
GTGTCGGCCC GGTACCGAAA CGTTAAGTAT ATCTATCAGG AAAATCAGGG ATTATCTGCT
GCGCGCAATA CAGGGACCAA GGCCAGCAAG GGTGATTTTG TGATCTTTCT GGATGCCGAC
GACTGGCTGT ACCCTGCCTG TATCGATATT GGTGCCAACC TGATGATCCA TAATCCAGCC
CTTGCTTTTG TATCGGGCGG GCACGATAAG GTGACGATAA ACAAGGAGTT ATTGTCGTCT
GAAGCTCGTA ACATTAACGA CCATCATTAC CTACGATTGC TCGAAGGCAA TTACATTGGC
ATGCACGCAA CGGTCATGTA CCGGCGTACC GTTCTGAACG CTTATGCTTT TGATACATCC
CTGAAAGCCT GCGAAGATTA CGATATGTAT TTACGGATAG CCCGTACCTA CCCCGTACTT
CACCACACGA ATAAGGTGGC GGCTTACCGG ATACTTCCCA AAAGTATGTC GGCTAGTAAT
ACCAAGATGC TCACTGCCGT GTTAAGTGTG CTGGGACGGC AACAGGAATT ACTAAAAGAT
GAATCGGAAA AAGAGGCTTA TCAGCGGGGG CAGCAAATCT GGAAGGATTA TTACGAAAGT
CAGATTGACC GGTTACCGGA AAAGCCTTAA
 
Protein sequence
MVKPYLVRLF RWVQRISNLL TGKPPLVTVV ITCYNHGQFL ADAIDSVVQQ TWSPFSKLAQ 
MVKPIEIIVV DDGSTDNTRE VSARYRNVKY IYQENQGLSA ARNTGTKASK GDFVIFLDAD
DWLYPACIDI GANLMIHNPA LAFVSGGHDK VTINKELLSS EARNINDHHY LRLLEGNYIG
MHATVMYRRT VLNAYAFDTS LKACEDYDMY LRIARTYPVL HHTNKVAAYR ILPKSMSASN
TKMLTAVLSV LGRQQELLKD ESEKEAYQRG QQIWKDYYES QIDRLPEKP