Gene Slin_2377 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_2377 
Symbol 
ID8726121 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp2866694 
End bp2867536 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content54% 
IMG OID 
Productglutamate racemase 
Protein accessionYP_003387196 
Protein GI284037266 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.629157 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.65613 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCACCC CCTCGCAACC CATTGGTGTC TTTGATTCTG GCTATGGCGG TCTGACCGTT 
CTGCGTGAAA TCGTTAAAAA GCTGCCGCAG TACGATTACA TCTACCTCGG CGATAATGCC
CGGACGCCTT ACGGAACCCG CTCGTTCGAT ACTGTTTACC ATTACACCCT CGAATGCGTG
CAGCACCTCT TCGACCGGGG CTGCCGACTG GTGATTCTGG CCTGCAATAC CGCTTCGGCA
AAGGCCCTTC GTAACATTCA GCAACTGGAT TTGCCCGCGC AATACCCCGG ACTGGATGGT
CCCGACCGGC GGGTGCTGGG CGTGATCCGT CCAACAACCG AAGTGATTGG TACCTACTCA
AAGACGGGGA AAGTGGGTGT TCTGGCCACA CGCGGAACCG TGACATCTGA GTCGTATCGG
GTGGAGATCG AGAAGTTTTT TCCAGGTCTG GGCGTTTTTC AGGAGGCTTG CCCGATGTGG
GTACCGCTGG TCGAAAATGG CGAATACGAC AGCCCAGGCG CAGACTATTT TGTAAAACAG
CACATCGACC GGCTCCTGGC CCAATCCCCT GATATTGACA CGCTGTTGCT GGCCTGCACG
CATTACCCCC TGTTACTGGA AAAAATTAAA CATTTTGCCC CCTCTGGCGC GACTATTTTA
AGTCAGGGCG GTATCGTGTC GGATAGTCTG GCCGATTACC TCGTTCGTCA CCCGGAAATT
GAAGCACAGT GCAGTAAGCA CGGCCAGCGA ACGTTCCTCA CAACTGATGC CACCGAGGAT
TTTGACCGGC AGGCAACCAT TTTTTATGGA CAACCCGTTC AGTCGATTCA TCTGGCCTTG
TAA
 
Protein sequence
MPTPSQPIGV FDSGYGGLTV LREIVKKLPQ YDYIYLGDNA RTPYGTRSFD TVYHYTLECV 
QHLFDRGCRL VILACNTASA KALRNIQQLD LPAQYPGLDG PDRRVLGVIR PTTEVIGTYS
KTGKVGVLAT RGTVTSESYR VEIEKFFPGL GVFQEACPMW VPLVENGEYD SPGADYFVKQ
HIDRLLAQSP DIDTLLLACT HYPLLLEKIK HFAPSGATIL SQGGIVSDSL ADYLVRHPEI
EAQCSKHGQR TFLTTDATED FDRQATIFYG QPVQSIHLAL