| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_2360 |
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| Symbol | |
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| ID | 8726104 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | - |
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| Start bp | 2841049 |
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| End bp | 2844291 |
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| Gene Length | 3243 bp |
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| Protein Length | 1080 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | |
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| Product | transporter, hydrophobe/amphiphile efflux-1 (HAE1) family |
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| Protein accession | YP_003387180 |
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| Protein GI | 284037250 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.216715 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCGCAG AAATATTCAT CAACCGACCT GTTACGGCTA TCGTCTCATC CATCGTCATT
GTGATACTGG GTGTACTGGC CTTGCTGAGC CTGCCGGTCA GCCAGTATCC GGATATTACC
CCCCCCGTGG TTCAGGTGAC GGGTACTTAT ACCGGGGCGG ATGCCCAAAC GGTAGAACAA
ACGGTGGCGA CACCCATTGA AACCCAGGTG AACGGTACGC CGGGGATGGA CTATGTGCAG
ACCAACGCGA CGAACGACGG CCGCATGAGC ATGAACGTTA CCTTTAAAGT GGGTACCGAC
GTGAACATTG CCGCGCTTGA TGTGCAGAAC CGGGTAGGTA TCGCCCAGCC GCAGTTACCT
CAGGAGGTTA CCCGCCTTGG CGTAGTGGTT CGGAAACGAA ACCCATCGCT GTTTATGCTG
GTAGCGATGT ATTCGCCGAA GGGTACGCAC AACGTCTCGT TTCTGGATAA CTACACTAAC
ATTTATATCC GGGACGCCCT GTTACGGGTG CCGGGCGTGG GCGATATTTT CAGCCGGGCC
GACGATTTTA GTATGCGGAT CTGGCTTAAG CCCGACCGGC TGGCACAACT GAACCTGACT
CCGGATGAGG TTGTAGCGGC CTTGCAGGAG CAGAACTTAC AGGTGGCAGG TGGTTCCGTC
GGCGCATCAC CCCAACCAGC TTCGCAGGCG TTCGAGTACT CGGTCTTCAC CAACAGCCGT
CTCAGTAAGG AAGAGGACTT TCGGAAAATC ATTGTTCGAA GTGATCCGGC AAAAGGGTCG
CTGGTGTATT TGAACGACGT AGCCCGGGTG CAATTGGGTA AGTTCTCCTA TGCCAGTAAC
TCCTTTGTGG ATGGCAAGCG GGCGTCGTAT CTGTTGGTCT ATCAGCTGCC GGGCAGTAAC
GCGCTGGAGA CGGCCAAAGG TGTTTACGCG GCTATGGATA AACTGAAACA GACGTTTCCC
AAAGACATCG AGTACGTGGT GCCGTTTGAA TCGGTTTCCG TCATTCAGGT GTCGATTGGC
GAAGTGGTCG AGACCCTGGC CGAAGCGCTG GTGCTGGTTA TTCTGGTCGT ATTCCTGTTC
CTGCAAAGCT GGCGGGCTAC GCTGATTACA CTGTTGGCTA TTCCGGTTTC TATTGTCGGC
ACGTTTGCCT TGTTCGTACC GCTCGGTTTT ACGATCAATA CGTTGACGCT GTTTGCTTTC
GTACTGGCCA TCGGTATTGT GGTCGATGAT GCCATTGTGG TGGTGGAAGC CGTGCAGGTG
AACATCGACA AAGGCATGTC GCCCAAAGAA GCCACGAAAG AGGCCATGCG GGAAATATCG
GCGCCGGTAA TTGCCATTGC GCTGATTCTG GCGGCTGTAT TCGTGCCGGT GGGTTTCATC
CCCGGTATCG TGGGGCGACT GTATCAGCAG TTTGCCATTA CCATCGCCGT GTCGGTATTG
ATCTCTGCCT TTGTGGCCCT GTCGCTGACA CCCGCTTTGT GTACGCTGTT GCTGAAGCCC
ATGCACATCG ACGAGAATGC GAAAGGGTTA AACAAGTTCT TTTACAAGTT TAACCAGTGG
TTTGAGCGGG TAACGAATGC GTACTCGAAC GGGGTACAAC GGCTCATCAA GGCAACTCCA
CTGGTCATCG TCGGGCTGAT CGTCGTGTAC ATCGGGACGG GACTGCTGTT CCGGGCTAAG
CCAACGGGCT TTATTCCAAC GGAGGATGAA GGCCGGTTGA TCGTGACCTA CGAAATCCCC
GAAGCGGCTT CTACTACGCG TAGTCTTGAG GTGCTGAACC GAATCATGAC GATTCTGAAA
AATCAGCCTT ATGTCAATCA CTTTGCGGCT TTGGGCGGGC TGAACGCCAT TACGTTTGCG
TCCAAATCGA ATAGCGGTAC GGTATTCATG CAGCTGAAGC CCTGGGACGA ACGGAAGGAG
CGAAACATGC AGGCCGATTC GCTGGTGGTT AAACTGCAAA AGGAATTGTC GGTTCTGAAC
GATGCCCGCC CGCAGGTACT TCAACCGCCC GCTATTCCGG GTCTGGGGCA GTCTTCCGGG
TTTACCTTCG AAATTCAGCA GCGCGAATCC AACGACGATG TCCGGGCGTT TGATAACGTG
GTGCAGAACT TCCTGGCCGA AGCCAACAAA CGTCCCGAAA TATCCCGCGC TTTCACCTAT
TTCACGGCCA AATCACCCGC TTACCGGGTC GACGTTGACC GCGACAAGTG TAAGAAGCTG
GGTATTCCGG TCAGCTCGGT GTATACCACT ATGCAGACAC TGTTGGGTAG CCAGTACGTT
AACGACTTTA TTATTTACGG TCGCAAGTTC CGGGTTGTGG CGCAGGCCGA TACCATGTAC
CGGGCCGATA TAAAGGCGCT CAATAATTAT TACGTCCGGA ATAGTGGCGG TCAACTAGTG
CCCATCAGCA CGGTGATCAA GACGAGTGTG ATTGAAAACG CGCCGTTAAT TTCCCACTTC
AACCTGTTCC GCTCGGTTGA AGTAAACGGG GGAGCCAAGC CAGGATACAG CACCAGTCAG
GCCAACGACG CCCTGCGCGA AGTAGCGGCC AAAGTTCTGC CCGCTGGTTA TGCCTACGAT
TTCGGTGGTC TTAGCCGGGA GGAGATCAAC GCGGGTAGCA GCTCGATTTA CATCTTCATG
CTGTCGATTG GTTTCGTCTT TCTCTTCCTG GCCGCCCTGT ACGAAAGCTG GTCGGTGCCG
TTTTCGGTAC TCCTGTCTGT TCCGATTGGG GCGCTGGGGG CCATTACCGC CCTGATTATA
TTCCCGTACC TGACCAACAA CGTCTATGCC CAGATTGGGT TAATCACACT CATCGGTCTG
GCGGCCAAAA ACGCCATTCT AATCGTGGAA TTTGCCAAAG AGCGGGTAGA TAAAGGAGAG
GACTTACTCG AATCGACCAT CGAAGCCGTT CGTCTGCGTC TGCGCCCGAT CCTGATGACG
TCGCTGGCGT TCATTCTGGG GGTGTTCCCG CTGGCGATAG CCAGTGGAGC GGGCGGTGTT
GCCCGCGCAA CCATCGGCCG TACTGTGCTG GGCGGTATGC TGGCCGCGAC CTCGCTGGCC
ATTTTCGTGG TACCGGTGCT GTACGTGGCT ATTTCGCGAC TGGCCTACGG TAAGAAAGGG
CTGGCAGCGC TGAAAGAAAA AGGCGAGAAA GCTAAAAAAG ATGAAAATCA GAATGGAACG
ACTGAACTGA CACCACAACC TGTGTCGTCG AATGGCCATT CGGGCGACAA CGTTCGTCGG
TAA
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| Protein sequence | MFAEIFINRP VTAIVSSIVI VILGVLALLS LPVSQYPDIT PPVVQVTGTY TGADAQTVEQ
TVATPIETQV NGTPGMDYVQ TNATNDGRMS MNVTFKVGTD VNIAALDVQN RVGIAQPQLP
QEVTRLGVVV RKRNPSLFML VAMYSPKGTH NVSFLDNYTN IYIRDALLRV PGVGDIFSRA
DDFSMRIWLK PDRLAQLNLT PDEVVAALQE QNLQVAGGSV GASPQPASQA FEYSVFTNSR
LSKEEDFRKI IVRSDPAKGS LVYLNDVARV QLGKFSYASN SFVDGKRASY LLVYQLPGSN
ALETAKGVYA AMDKLKQTFP KDIEYVVPFE SVSVIQVSIG EVVETLAEAL VLVILVVFLF
LQSWRATLIT LLAIPVSIVG TFALFVPLGF TINTLTLFAF VLAIGIVVDD AIVVVEAVQV
NIDKGMSPKE ATKEAMREIS APVIAIALIL AAVFVPVGFI PGIVGRLYQQ FAITIAVSVL
ISAFVALSLT PALCTLLLKP MHIDENAKGL NKFFYKFNQW FERVTNAYSN GVQRLIKATP
LVIVGLIVVY IGTGLLFRAK PTGFIPTEDE GRLIVTYEIP EAASTTRSLE VLNRIMTILK
NQPYVNHFAA LGGLNAITFA SKSNSGTVFM QLKPWDERKE RNMQADSLVV KLQKELSVLN
DARPQVLQPP AIPGLGQSSG FTFEIQQRES NDDVRAFDNV VQNFLAEANK RPEISRAFTY
FTAKSPAYRV DVDRDKCKKL GIPVSSVYTT MQTLLGSQYV NDFIIYGRKF RVVAQADTMY
RADIKALNNY YVRNSGGQLV PISTVIKTSV IENAPLISHF NLFRSVEVNG GAKPGYSTSQ
ANDALREVAA KVLPAGYAYD FGGLSREEIN AGSSSIYIFM LSIGFVFLFL AALYESWSVP
FSVLLSVPIG ALGAITALII FPYLTNNVYA QIGLITLIGL AAKNAILIVE FAKERVDKGE
DLLESTIEAV RLRLRPILMT SLAFILGVFP LAIASGAGGV ARATIGRTVL GGMLAATSLA
IFVVPVLYVA ISRLAYGKKG LAALKEKGEK AKKDENQNGT TELTPQPVSS NGHSGDNVRR
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