Gene Slin_2318 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_2318 
Symbol 
ID8726062 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp2797630 
End bp2798916 
Gene Length1287 bp 
Protein Length428 aa 
Translation table11 
GC content47% 
IMG OID 
Productamidohydrolase 
Protein accessionYP_003387138 
Protein GI284037208 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.246502 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.0431533 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTTTAT CCGTTTACTA CATCAGTGTT TTCCTGGTAG GATTGACGTT TACAAATACA 
GATGCTCAGA AATCGGCGAT TGTTTGCCGC CAGTTGATCG ACGGTACGGG AAAGGTCATT
CAGAACGCAG CCCTTGTTCT GGATGCTGAA CGAATCATAG CGGCTGGGAG CAGGCAAATT
ATCCCTAAAG GTGTTCCCAT TACAGACCTG GGCGAGTACA CGGTTCTCCC CGGCATGATC
GATGCCCACG TTCATCCATT TATCGACAAA GACGATTATC AGGTCGATCA TTTACGCCGG
AGTTCAGCCC AGAAAGCACT CGAAGGACTT AAGAACGTAC AGGATTTACT ACTGGCGGGT
TGGACATCTT TACGAATTGC CGGTGATGCT GATGTAGCGT ACGCACAGTT CGATATTCGT
AATGCCATTA ATAAAGGACT GTTTGTTGGC CCGCGCATCT TCGGAGCAGG GCACTATATA
TCCGTAACGG GCGGTGGGGG TGATATTAAC TTTATGTCTC ATGAGCAACC CATTCTCGCC
GATGGCCTTA TAGCAAATGG CCCTGATGAA ATGCGCAAAG CCGTTCGGGA AGAGATAAAA
CACGGTAGCG ACTGGATTAA AATACTGGTA ACGGGCGCAT TTATGACCGT TGGTGATAAT
CCGCAGGACG TTCATTTCAG TGCCGAAGAA TTAAGGGCCG TGATGGAAGA GGCCGCCCGC
CGACATCGAC CCGTAATGGC TCATGCCCAT GCTACAGAAG GCATTAAAAT GGCCATTAAA
GCTGGCGTCC GTTCTATAGA GCATGGTTCT TATCTGGACG AGGAAGGAAT CGACCTGCTA
ATTCAGCATG GCACATACCT TGTGCCAACA CTCAGTGTTG ACCTATTTTT TCAGGAGAAG
TACTTCAATA GTAAAGCGCT CGCCAAAGCT GTTCAATTAG GGAAAAAAGT AAACGATGAA
AACACCAGAA ACAGGATGAT CTCGCTTGCC ATTAGTAAAG GCGTTAAAGT AGCACTAGGT
ACCGATAACG TTGGCTTTCC ACCTACTTTC CCGGCCCGTG AATTTGCTGA GTTAGTAAAA
CTAGGCATGA CACCAATGCA GGCAATTCAG GCAGGCACCA AAGTAAATGC CGAGATGCTA
GGTAAGGAAA AAGACCTTGG TACGCTTGAA ACAGGGAAAT TTGCCGATCT GATTGCGGTT
AAAGGTAATC CGCTCACCGA TATTACAGAG CTACAACGGG TCAAATTTGT GATGATTGGA
GGCAAAATCA TCAAATTTGA GAAGTAA
 
Protein sequence
MRLSVYYISV FLVGLTFTNT DAQKSAIVCR QLIDGTGKVI QNAALVLDAE RIIAAGSRQI 
IPKGVPITDL GEYTVLPGMI DAHVHPFIDK DDYQVDHLRR SSAQKALEGL KNVQDLLLAG
WTSLRIAGDA DVAYAQFDIR NAINKGLFVG PRIFGAGHYI SVTGGGGDIN FMSHEQPILA
DGLIANGPDE MRKAVREEIK HGSDWIKILV TGAFMTVGDN PQDVHFSAEE LRAVMEEAAR
RHRPVMAHAH ATEGIKMAIK AGVRSIEHGS YLDEEGIDLL IQHGTYLVPT LSVDLFFQEK
YFNSKALAKA VQLGKKVNDE NTRNRMISLA ISKGVKVALG TDNVGFPPTF PAREFAELVK
LGMTPMQAIQ AGTKVNAEML GKEKDLGTLE TGKFADLIAV KGNPLTDITE LQRVKFVMIG
GKIIKFEK