Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_2318 |
Symbol | |
ID | 8726062 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 2797630 |
End bp | 2798916 |
Gene Length | 1287 bp |
Protein Length | 428 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | |
Product | amidohydrolase |
Protein accession | YP_003387138 |
Protein GI | 284037208 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.246502 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.0431533 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTTTAT CCGTTTACTA CATCAGTGTT TTCCTGGTAG GATTGACGTT TACAAATACA GATGCTCAGA AATCGGCGAT TGTTTGCCGC CAGTTGATCG ACGGTACGGG AAAGGTCATT CAGAACGCAG CCCTTGTTCT GGATGCTGAA CGAATCATAG CGGCTGGGAG CAGGCAAATT ATCCCTAAAG GTGTTCCCAT TACAGACCTG GGCGAGTACA CGGTTCTCCC CGGCATGATC GATGCCCACG TTCATCCATT TATCGACAAA GACGATTATC AGGTCGATCA TTTACGCCGG AGTTCAGCCC AGAAAGCACT CGAAGGACTT AAGAACGTAC AGGATTTACT ACTGGCGGGT TGGACATCTT TACGAATTGC CGGTGATGCT GATGTAGCGT ACGCACAGTT CGATATTCGT AATGCCATTA ATAAAGGACT GTTTGTTGGC CCGCGCATCT TCGGAGCAGG GCACTATATA TCCGTAACGG GCGGTGGGGG TGATATTAAC TTTATGTCTC ATGAGCAACC CATTCTCGCC GATGGCCTTA TAGCAAATGG CCCTGATGAA ATGCGCAAAG CCGTTCGGGA AGAGATAAAA CACGGTAGCG ACTGGATTAA AATACTGGTA ACGGGCGCAT TTATGACCGT TGGTGATAAT CCGCAGGACG TTCATTTCAG TGCCGAAGAA TTAAGGGCCG TGATGGAAGA GGCCGCCCGC CGACATCGAC CCGTAATGGC TCATGCCCAT GCTACAGAAG GCATTAAAAT GGCCATTAAA GCTGGCGTCC GTTCTATAGA GCATGGTTCT TATCTGGACG AGGAAGGAAT CGACCTGCTA ATTCAGCATG GCACATACCT TGTGCCAACA CTCAGTGTTG ACCTATTTTT TCAGGAGAAG TACTTCAATA GTAAAGCGCT CGCCAAAGCT GTTCAATTAG GGAAAAAAGT AAACGATGAA AACACCAGAA ACAGGATGAT CTCGCTTGCC ATTAGTAAAG GCGTTAAAGT AGCACTAGGT ACCGATAACG TTGGCTTTCC ACCTACTTTC CCGGCCCGTG AATTTGCTGA GTTAGTAAAA CTAGGCATGA CACCAATGCA GGCAATTCAG GCAGGCACCA AAGTAAATGC CGAGATGCTA GGTAAGGAAA AAGACCTTGG TACGCTTGAA ACAGGGAAAT TTGCCGATCT GATTGCGGTT AAAGGTAATC CGCTCACCGA TATTACAGAG CTACAACGGG TCAAATTTGT GATGATTGGA GGCAAAATCA TCAAATTTGA GAAGTAA
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Protein sequence | MRLSVYYISV FLVGLTFTNT DAQKSAIVCR QLIDGTGKVI QNAALVLDAE RIIAAGSRQI IPKGVPITDL GEYTVLPGMI DAHVHPFIDK DDYQVDHLRR SSAQKALEGL KNVQDLLLAG WTSLRIAGDA DVAYAQFDIR NAINKGLFVG PRIFGAGHYI SVTGGGGDIN FMSHEQPILA DGLIANGPDE MRKAVREEIK HGSDWIKILV TGAFMTVGDN PQDVHFSAEE LRAVMEEAAR RHRPVMAHAH ATEGIKMAIK AGVRSIEHGS YLDEEGIDLL IQHGTYLVPT LSVDLFFQEK YFNSKALAKA VQLGKKVNDE NTRNRMISLA ISKGVKVALG TDNVGFPPTF PAREFAELVK LGMTPMQAIQ AGTKVNAEML GKEKDLGTLE TGKFADLIAV KGNPLTDITE LQRVKFVMIG GKIIKFEK
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