Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_2297 |
Symbol | |
ID | 8726040 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 2777287 |
End bp | 2777928 |
Gene Length | 642 bp |
Protein Length | 213 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003387117 |
Protein GI | 284037187 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.0926139 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.000164645 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGACATTTA TGGCTTTTCA ACGATTACTT TATCAGCAGC TAACGCCTTT TTTTGAACAG TATGATTTTT TTCTATTACC CGAAAAGAAT CTGTATCGCC GGGCAACGTC AATAGGTTTC CAATCGATAA TGCCCACGCT TACTGTCTAC AATGATGAAA CTGTACTAGA CGTTAAGCTT GGTTGCCGGA ATGAGCAAGT CGAGCAAATC GCTCAGCAGT TTGTAAGCAG TCCGGCAGTG AGTCATCAGG ATGCGGTCAC TATCACTGTT TCAATTAGTC AATTCAGCGG CTTTAAAATC GCCCCTTTCA AGCTTTCCAC CGAAAAGGAA TTAGTCACTA CCTGCCGACA GATTGAGTCA TTTTTTCAAA CAAGTGGTTT CACATTTCTT AACTTTTCAT GCACTTTACC CGTATTAGAC CATCTGTTAA ATGAACAACC CAGTCGGCCC TGTCAGTACG TATATAACCA AATGCATCGT TATTATAAAG GATTAACAAC AGCGAGTTTA ACTCATACGA ATCAGTTCGA TAGTTTATGC GATCAATACA GGCGCTTACT CGTAAAACAA ACGCACAATC CTTATGAGCC GCTACAGTTT GAACGACTAA TTGCCTACTT GCGGTACTAT TTCTCAAATT AA
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Protein sequence | MTFMAFQRLL YQQLTPFFEQ YDFFLLPEKN LYRRATSIGF QSIMPTLTVY NDETVLDVKL GCRNEQVEQI AQQFVSSPAV SHQDAVTITV SISQFSGFKI APFKLSTEKE LVTTCRQIES FFQTSGFTFL NFSCTLPVLD HLLNEQPSRP CQYVYNQMHR YYKGLTTASL THTNQFDSLC DQYRRLLVKQ THNPYEPLQF ERLIAYLRYY FSN
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