Gene Slin_2238 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_2238 
Symbol 
ID8725978 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp2708959 
End bp2710083 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content53% 
IMG OID 
Productglycosyl transferase family 2 
Protein accessionYP_003387058 
Protein GI284037128 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGATCT TTCTTCTGGT AATCAGCGGC CTCTACGCGC TGTTCACGCT ACTGCTCTGG 
ATCACCTGGT TACGCATCCC GCCGGGTCAG CTGCCGGGCG GGTCTATAAC CGATGGGCCG
CGTATTACCG TCGTGATTCC CGTTCGCAAC GAAGCCGATA ACATCCGCAA CCTGCTCGAT
GACCTGAGCC GCCAGACCTA TGCCCGGTTC GAGGTAATCG TAGCCGATGA TTCATCGACC
GACGCCACCC TGTCAATCGT TCAGCAGTAT GCGCAGTCGG CCCCCTTTGC GCTCCGTCCA
TTGCCGCTGA CTAACGAACG CACGGCATCG CCCAAGAAAC GGGCCATCAC CCAAAGCATA
GCCATAGCCA CCGGCGACCT GATTCTGACA ACCGACGGCG ACTGCCGGGT GGGTCCAAAT
TGGTTAGCTT CTTATGCCGC CTTTCAGACT CAAACGGGTG CCCGGCTGAT ATCAGGACCA
GTCACCTTTA CCGACGAGCA TACGGTTTTT GACGCGCTGC AAACGGTTGA GTTTTCGAGT
CTTATCGGTT CCGGAGCCTG CACCATGCAG CTTGGTGTGC CGACTATGTG CAATGGAGCC
AACCTGTGCT ACGTGAAAGA GGTGTTTGCA GAGGTGGGCG GCTTCGCCGG TTTCGATCAC
CTTGCCTCGG GCGACGATGA GTTTTTGATG CATAAGATTT CGGTACGGTA TCCCAACGGG
GTTCAGTTTC TGAAAAGCCC GGAAGCTATC GTTCGGACGG GCACTCACCA GACGTGGCGT
GGATTTTATA ACCAGCGGAA ACGATGGGCC AGCAAGTGGC GGGCTTACGA TAGTTACCTG
CCGTCGCTCC TGGCGGTGTT TATATTCCTG TGTAATGTTG TCCCTGTTGT AGCTGTTCTG
GGCTGGTGCC TCGATTTTTT AAACGGAAAC GTAACACTGC TCGTTATTGG GCTGAAGCTG
GTACCGGAGT TTTTGTTTTT ACGACAGATT CTTGTTTTTT TACAAAAAAA ATCGTCGGTG
CCGGTTATCC CGCTGACTCA ATTTATATAC CCGCTTTATG TACTTTTCTT CGGGCTGGCT
GCTCAGGGAA AAGGATACTA TTGGAAAGGA AGAAAACTTA CGTAA
 
Protein sequence
MTIFLLVISG LYALFTLLLW ITWLRIPPGQ LPGGSITDGP RITVVIPVRN EADNIRNLLD 
DLSRQTYARF EVIVADDSST DATLSIVQQY AQSAPFALRP LPLTNERTAS PKKRAITQSI
AIATGDLILT TDGDCRVGPN WLASYAAFQT QTGARLISGP VTFTDEHTVF DALQTVEFSS
LIGSGACTMQ LGVPTMCNGA NLCYVKEVFA EVGGFAGFDH LASGDDEFLM HKISVRYPNG
VQFLKSPEAI VRTGTHQTWR GFYNQRKRWA SKWRAYDSYL PSLLAVFIFL CNVVPVVAVL
GWCLDFLNGN VTLLVIGLKL VPEFLFLRQI LVFLQKKSSV PVIPLTQFIY PLYVLFFGLA
AQGKGYYWKG RKLT