Gene Slin_2231 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_2231 
Symbol 
ID8725969 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp2702082 
End bp2702822 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content50% 
IMG OID 
ProductUroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase 
Protein accessionYP_003387051 
Protein GI284037121 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.311869 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.436823 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTGT ACCTTGTGCC GACGCCCATC GGTAACCTTG ACGACATCAC ACTCCGGGCT 
ATTAAAGTCC TGCAAAGTGT CGACTCCATT CTGGCCGAAG ACACCCGTAC GTCGGGTGTA
CTGCTGCGCC ATTTGAACAT TAGCAAACCA CTGCACAGCT ATCATATCTT CAACGAACAC
CAAACCGTTC AGCGGTTGAT TAGTCAGTTG AAAGAAGGCA AAACACTGGC GCTGGTTTCT
GATGCGGGTA CGCCGGGTAT TTCAGATCCG GGTTTTCTGC TCGTTCGTGA ATGCATCAAG
AATGAAATAA CGGTCGAGTG CCTCCCCGGA CCTACCGCCT TTGTTCCCGC CCTTGTCAAC
TCCGGCTTAC CCAACGACCG GTTTACCTTC GAGGGCTTTT TACCGCACAA AAAAGGACGG
CAAACCCGAT TGGCTGAACT GGCCGGGGAA GAGCGGACGA TGGTTTTTTA TGAATCGCCC
CACCGGCTGT TGAAAACCCT GCAACAGTTT GCCGATGTGT TCGGACCCGA CCGACCGGCC
AGTGTTTCGC GGGAGCTTAC CAAGATGTTT GAAGAAAATC AGCGAGGGGC GTTGTCCGAA
CTAATTGCTT ATTTTGCCCA GAAAACCATT AAAGGTGAAC TAGTCGTTTG TGTGCAGGGT
AAAGAACCAA GCCGGGGCAA GGCTAAACGA GTGTATGATA CTGAACTTGA TGATACTGAA
AAGGAGGATG AAGATGAATA A
 
Protein sequence
MKLYLVPTPI GNLDDITLRA IKVLQSVDSI LAEDTRTSGV LLRHLNISKP LHSYHIFNEH 
QTVQRLISQL KEGKTLALVS DAGTPGISDP GFLLVRECIK NEITVECLPG PTAFVPALVN
SGLPNDRFTF EGFLPHKKGR QTRLAELAGE ERTMVFYESP HRLLKTLQQF ADVFGPDRPA
SVSRELTKMF EENQRGALSE LIAYFAQKTI KGELVVCVQG KEPSRGKAKR VYDTELDDTE
KEDEDE