Gene Slin_2222 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_2222 
Symbol 
ID8725960 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp2692714 
End bp2693157 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content51% 
IMG OID 
Productprotein of unknown function DUF55 
Protein accessionYP_003387043 
Protein GI284037113 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.155182 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTACT GGCTCGTCAA ATCTGAACCC GATACGTACG GGTGGCATCA TTTCATTGAA 
CAAGGTCGTG CCACCTGGGA TGGCGTTCGC AATTACCAGG CCCGCAATAA CCTGAAAGGC
ATGTTAATAG GCGATCTGGT ATTGTTTTAT CACAGTGTCA CCAGTCCTGC CGTTGTTGGG
TTAGCTACCG TGGTACGAAG CCACTTTCAG GATCCAACCG TGCCGGAAGA TCCGCGCTGG
GTGGCCGTTG AACTCGAACC GGTCATGGCT TTCGAAAAGC CCGTTACGCT GGCGCATATC
AAAGCCGAGC CTATGTTAGC AAGCATAAGC TTAATCAAAC AATCCCGCCT GTCGGTTATG
CCCGTTCGTG CCGACGAGTT TGAGTTGATT CTGAAAATGG GCCAGGCAAC GCGTGAAGAA
GCAAAGGTGA TGAGTGAACT GTAA
 
Protein sequence
MNYWLVKSEP DTYGWHHFIE QGRATWDGVR NYQARNNLKG MLIGDLVLFY HSVTSPAVVG 
LATVVRSHFQ DPTVPEDPRW VAVELEPVMA FEKPVTLAHI KAEPMLASIS LIKQSRLSVM
PVRADEFELI LKMGQATREE AKVMSEL