| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_2219 |
|---|
| Symbol | |
|---|
| ID | 8725957 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | - |
|---|
| Start bp | 2688412 |
|---|
| End bp | 2690355 |
|---|
| Gene Length | 1944 bp |
|---|
| Protein Length | 647 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | |
|---|
| Product | threonyl-tRNA synthetase |
|---|
| Protein accession | YP_003387040 |
|---|
| Protein GI | 284037110 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.0771332 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTGCGC AGGACGAACA AATCCGCGTG ACGTTGCCGG ACGGCAGCGT TCGGGAGTAT
CCCAAAGGCA GCACCGGGTT GGATATTGCC ACAAAAATTA GTGAAGGTCT GGCGCGCAAC
GTGCTGGCTG CCAAAGTAAA TGGTGTTATT CAGGATGCCA CCAGACCCAT CGACGAAGAT
GCCAGTGTTC AGCTTCTGAC CTGGAATGAC GCCGAAGGGA AAGCAACGTT CTGGCATTCG
TCGGCTCACT TACTGGCCGA AGCCCTCGAA TCGCTGTATC CGGGTGTGAA ATTCGGTATC
GGACCTGCCA TCGAGACGGG ATTCTATTAC GACGTTGACC TCGGTGGCCA GCCATTTTCG
CAGGAAGACT TTAAGAAGGT TGAGGACAAA ATGCTCGAAC TGGCCCGCCA GAAACAGCAG
TACATCCGTA AGCCGATGAG CAAAGCCGAC GCCATTGCCT ATTTTGAAGA AAAAGGCGAT
CCGTACAAAC TCGATTTGCT GGAAGGGCTG GATGATGGAA CGATCACGTT TTACACCCAG
GGCGATTTTA CGGATCTCTG TCGCGGGCCA CACATCCCCA ATACCGGATT CATCAAAGCG
GCCAAGCTCA TGAACGTGGC CGGTGCGTAC TGGCGCGGCA ACGAAAAGAA CAAGCAGCTA
ACCCGTATTT ATGCGGTAAC TTATCCGAAG CAGAAAGAAC TCGACGACTA TCTGTTTTTG
CTGGAAGAAG CCAAAAAACG CGACCACCGC AAACTGGGTA AAGAACTGGA GCTATTCGCC
TTCTCGGAAA AAGTAGGTGC AGGTCTGCCA TTGTGGCTTC CCAAAGGCAC CGTGCTGCGC
GAGCGGCTTG AGAATTTTCT GCGGAAGGCG CAGGTTCGGG CGGGATACTC GCCCGTTGTG
ACGCCCCACA TTGGCAGCAA GCAGTTGTAC GTGACCTCGG GCCACTGGGA GAAATACGGG
GAGGATTCGT TCCAGCCCAT CAGAACCCCC GACCCGAACG AGGAGTTTTT GCTTAAACCC
ATGAACTGCC CCCACCACTG CGAAATCTAT AAAACTAAAC CTCGTTCGTA TCGCGATCTG
CCCTTGCGGT TGGCCGAATT CGGAACGGTG TATCGGTATG AGCAGTCGGG CGAGTTACAT
GGTCTGACAC GGGTACGGGG TTTTACGCAG GATGACGCCC ACATCTTCTG CCGCCCCGAT
CAGGTGAAAG AAGAATTTAT GAAGGTGATC GACCTGGTGC TGTACGTATT TAATACACTC
GGTTTCTCGG ACTACAGCGC CCAGATCTCC CTTCGCGATC CCGAAAATAA AACTAAATAC
ATTGGTTCGG ACGACCTTTG GGAAAAAGCT GAATCGGCGA TTATCGAAGC CGCTGCGGAA
AAAGGCTTGC CAACCGTAAC GGAGCTGGGC GAAGCCGCTT TCTATGGACC GAAGCTTGAT
TTTATGGTGC GGGATGCTAT TGGGCGGAAA TGGCAGTTAG GAACGATTCA GGTCGATTAC
AACCTGCCCA ACCGCTTCGA ACTGGAATAT ATCGGTGCCG ACAACCAGAA ACACCGCCCG
GTTATGATTC ACCGGGCACC GTTCGGGTCA ATGGAGCGGT TTATTGCCAT TCTTATCGAA
AACTCGGGCG GCAACTTCCC GCTCTGGCTC TCTCCCGATC AGATTGCGAT CCTGCCGATT
TCTGAAAAGT ACGAAGACTA CGCCAATGAC CTGTTCTTCA GTTTACAGGA GAACGACATT
CGTGGCTTTG TCGACTTACG CGATGAGAAG ATCGGCCGTA AGATCAGAGA TGCGGAGGTT
AACAAAGTGC CGTATATGCT GATTGTTGGT GAGAAAGAAG CCGCTGAAGG AACGGTATCT
GTCCGGCGCA AAGGCCAGGG CGATCTGGGT AGCATGCCAA TTGCCGACTT CATACAAACG
TTTAAACGTG AAGTAACCGT TTAG
|
|---|
| Protein sequence | MIAQDEQIRV TLPDGSVREY PKGSTGLDIA TKISEGLARN VLAAKVNGVI QDATRPIDED
ASVQLLTWND AEGKATFWHS SAHLLAEALE SLYPGVKFGI GPAIETGFYY DVDLGGQPFS
QEDFKKVEDK MLELARQKQQ YIRKPMSKAD AIAYFEEKGD PYKLDLLEGL DDGTITFYTQ
GDFTDLCRGP HIPNTGFIKA AKLMNVAGAY WRGNEKNKQL TRIYAVTYPK QKELDDYLFL
LEEAKKRDHR KLGKELELFA FSEKVGAGLP LWLPKGTVLR ERLENFLRKA QVRAGYSPVV
TPHIGSKQLY VTSGHWEKYG EDSFQPIRTP DPNEEFLLKP MNCPHHCEIY KTKPRSYRDL
PLRLAEFGTV YRYEQSGELH GLTRVRGFTQ DDAHIFCRPD QVKEEFMKVI DLVLYVFNTL
GFSDYSAQIS LRDPENKTKY IGSDDLWEKA ESAIIEAAAE KGLPTVTELG EAAFYGPKLD
FMVRDAIGRK WQLGTIQVDY NLPNRFELEY IGADNQKHRP VMIHRAPFGS MERFIAILIE
NSGGNFPLWL SPDQIAILPI SEKYEDYAND LFFSLQENDI RGFVDLRDEK IGRKIRDAEV
NKVPYMLIVG EKEAAEGTVS VRRKGQGDLG SMPIADFIQT FKREVTV
|
|---|
| |