Gene Slin_2196 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_2196 
Symbol 
ID8725934 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp2661636 
End bp2662214 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content49% 
IMG OID 
ProductMethyltransferase type 12 
Protein accessionYP_003387017 
Protein GI284037087 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.114606 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.00107741 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGGATAAAT CAAACGGGTA TGAAGAGATC GCGGCTCGTT TTATCATGAC TCGCACCCAA 
GCCATTGGCT CATCATCGGT TCGGGATTGG GCCAAAACAT TGCCCCCAAA CGCTACGGTG
CTCGACTTGG GCTGCGGTTC AGGGATGCCA ATTGCTAAAC TATTGCTGGA GGAAGGCATG
AATGTTTATG GCCTTGATGC TTCCCCAACC ATGATCCAAA CCTTCCAACT CAATTTCCCC
GCTTTGCCTG CTGCCTGCGA AGGGGTGGAA GATTCTTTAT TTTTCAACCG CCATTTTGAG
GCCATTATCG CTTGGGGCCT GTTGTTTATC TTACCCATGG AAGTACAGCA ATTGGTGCTA
CAAAAAGCAG CGGCTGCTTT GCCAACCGGT GGCAAGCTCT TGTTTACGGC TCCCGCTCAA
GCCGCTAAGT GGACGGATAT GATGACTGGA CAGGAGTCCA TCTCTCTGGG AGCCGAGCAA
TATAAGTTGT TACTAGCGGC ATCCGCACTC ATTCTGGTTG AAGAATTCGA CGATGAAGGG
GAAAACCATT ATTATCATGC CGTCAAAGTA GGAGAATAG
 
Protein sequence
MDKSNGYEEI AARFIMTRTQ AIGSSSVRDW AKTLPPNATV LDLGCGSGMP IAKLLLEEGM 
NVYGLDASPT MIQTFQLNFP ALPAACEGVE DSLFFNRHFE AIIAWGLLFI LPMEVQQLVL
QKAAAALPTG GKLLFTAPAQ AAKWTDMMTG QESISLGAEQ YKLLLAASAL ILVEEFDDEG
ENHYYHAVKV GE