Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_2196 |
Symbol | |
ID | 8725934 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 2661636 |
End bp | 2662214 |
Gene Length | 579 bp |
Protein Length | 192 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | |
Product | Methyltransferase type 12 |
Protein accession | YP_003387017 |
Protein GI | 284037087 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.114606 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.00107741 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGGATAAAT CAAACGGGTA TGAAGAGATC GCGGCTCGTT TTATCATGAC TCGCACCCAA GCCATTGGCT CATCATCGGT TCGGGATTGG GCCAAAACAT TGCCCCCAAA CGCTACGGTG CTCGACTTGG GCTGCGGTTC AGGGATGCCA ATTGCTAAAC TATTGCTGGA GGAAGGCATG AATGTTTATG GCCTTGATGC TTCCCCAACC ATGATCCAAA CCTTCCAACT CAATTTCCCC GCTTTGCCTG CTGCCTGCGA AGGGGTGGAA GATTCTTTAT TTTTCAACCG CCATTTTGAG GCCATTATCG CTTGGGGCCT GTTGTTTATC TTACCCATGG AAGTACAGCA ATTGGTGCTA CAAAAAGCAG CGGCTGCTTT GCCAACCGGT GGCAAGCTCT TGTTTACGGC TCCCGCTCAA GCCGCTAAGT GGACGGATAT GATGACTGGA CAGGAGTCCA TCTCTCTGGG AGCCGAGCAA TATAAGTTGT TACTAGCGGC ATCCGCACTC ATTCTGGTTG AAGAATTCGA CGATGAAGGG GAAAACCATT ATTATCATGC CGTCAAAGTA GGAGAATAG
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Protein sequence | MDKSNGYEEI AARFIMTRTQ AIGSSSVRDW AKTLPPNATV LDLGCGSGMP IAKLLLEEGM NVYGLDASPT MIQTFQLNFP ALPAACEGVE DSLFFNRHFE AIIAWGLLFI LPMEVQQLVL QKAAAALPTG GKLLFTAPAQ AAKWTDMMTG QESISLGAEQ YKLLLAASAL ILVEEFDDEG ENHYYHAVKV GE
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