Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_2186 |
Symbol | |
ID | 8725924 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 2653582 |
End bp | 2654328 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_003387009 |
Protein GI | 284037079 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.0361624 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAAATA ACATTAACGG AAAAGTGATC GTCATTACCG GCGCCAGCAG TGGTCTGGGC GAAGCGGCAG CCAGGCACTT GTCAGCGCTT GGGGCAACGG TTGTACTGGG TGCCAGAAGA GCCGACCGAA TTGACGAGCT GGCCAAGGAG ATTCAGGACC AGGGTGGAAA AGCACTGGCC ATGGCGACGG ATGTAACCCA GCGGGATCAA GTAAAGAATC TAGTCGATGC AGCGGTTGAC CAATTTGGGC GGGTAGACGT GATCCTGAAT AATGCCGGTA TCATGCCCTT ATCGCCGATG GACCGCCTGA ATGTGGCCGA GTGGGATACG ATGATCGATG TGAACATTAA AGGGGTGCTT AACGGTATTG CTGCCGTTCT CCCTTACATG AAAGAACAGA AGTCAGGTCA AATCATCAAC ACCTCTTCGG TGGCGGGTCA TAAAGTGTTT ACCGGCTCTG CGGTCTATTC GGCTACCAAA TATGCGGTGC GTGCCTTGAC AGAAGGCTTA CGGATGGAGG TGAAGCCGTA CAATATCCGG ACAACCATTG TTTGTCCCGG CGCGGTTCAA ACAGAATTGC TGGAGCATAT TACTGAAGCC GATATTCAAC AAGCCAATAA AGAGTATGTA GGAGCGGTAG GGATTAGTCC GGACAGTTTT GCCCGTGTGG TGGCATTTGC CATCAGTCAG CCGGAGGATG TAGACATCAA TGAAGTCATC TTCCGTCCGA CATCCCAGGA ACTCTAG
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Protein sequence | MENNINGKVI VITGASSGLG EAAARHLSAL GATVVLGARR ADRIDELAKE IQDQGGKALA MATDVTQRDQ VKNLVDAAVD QFGRVDVILN NAGIMPLSPM DRLNVAEWDT MIDVNIKGVL NGIAAVLPYM KEQKSGQIIN TSSVAGHKVF TGSAVYSATK YAVRALTEGL RMEVKPYNIR TTIVCPGAVQ TELLEHITEA DIQQANKEYV GAVGISPDSF ARVVAFAISQ PEDVDINEVI FRPTSQEL
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