Gene Slin_2116 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_2116 
Symbol 
ID8725854 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp2558999 
End bp2560153 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content48% 
IMG OID 
Productmonooxygenase FAD-binding protein 
Protein accessionYP_003386949 
Protein GI284037019 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.400145 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCCTTT GTGCCATGAA GAAAATCGCC AACACAATGG ACTTTATACA AGGAAAAGAC 
GTGCTCGTTT CAGGAGCCAG TATAGCCGGC CTTAGCGCTG CCTGGTGGAT GAATCAGTTA
GGCTATCGGG TAACGGTGGT CGAAATGGCC CCGCAACCCC GTGTTCATGG GGCGGCCGTT
GATTTTAAAG GCGATACCAT AACCGTTTTG AAACGCATGG GTCTGTATGA GCCGTTGACA
AAACACCGCT TACACGTCGA CTTGGTGGAG TTTAAGAATG CCGACGATCT GACGGAGAGC
TCGATACAGC TAGACGACAA AGCCTCTGAT GAGCTAGAGA TCGAGCGAGA TGCCTTTATC
GGTATTTTAT TCAATACGTT GAAAAACCAG GTTACCTTTT TGTTTAACGA CAGCATTACA
GCCCTTGACG AGATTGAGCA AGAAATTGTT GTGCACTTCA AACAGGGCTC ACCACGCTCT
TTTGATTTGG TGCTGGGCTG CGATGGGGTT CACTCAGGGG TAAGAAGGCT TTGGTTTGGT
GAGGAAGCTA CGTATGCCCA TTTTTTGAAT GCATATGGCT CGCTCACTAT TTTGCCTAAG
TTGCTGATTA ACCAAAGCAC GATGCAGCTG TACCGAGTGC CGGGTAAGTC CATTACCCTC
AATGCCTACA ATGATAAGAC GGATGTTATA TTCAGTTTCG TTTCAGACAC TGAAATTGCT
TATGATTATC GCAATAAGGA GCAGCAAAGA CAGCTGATTC TTGACCAGTT TGCCGGGCAA
AGCTGGCGTA CGGCCGAACT GTTGCAAGAA GTGCAGCAGT CGGATAACTT CTACTTTGTT
GACTTCTATC AGATCAAAAT GCCGTTCTGG TCAAAAGGTA GAGTGGCCTT AGTGGGTGAT
GCGGCCTATT GTGCTTCTCC GGCTTCGGGT ATGGGCGGTT CACTGGCTGT AAGCGGTGCT
GCGGCCTTGG CCGACGCTTT GCAAAAACAC GATGGTAACT ATGCATTAGC CTTCAGGGAT
TATAACACGA ACTTTCGTCC GTTTATTGAA AGTGTGCAGG CTGAAGCACA ACAAAACCTG
AGCACGGTTT TTCTTCCCCG AACCGAAGCA GGTATTCAGC AAGGTAATGC ACAAACAACC
CCTTTTTATG GGTAG
 
Protein sequence
MFLCAMKKIA NTMDFIQGKD VLVSGASIAG LSAAWWMNQL GYRVTVVEMA PQPRVHGAAV 
DFKGDTITVL KRMGLYEPLT KHRLHVDLVE FKNADDLTES SIQLDDKASD ELEIERDAFI
GILFNTLKNQ VTFLFNDSIT ALDEIEQEIV VHFKQGSPRS FDLVLGCDGV HSGVRRLWFG
EEATYAHFLN AYGSLTILPK LLINQSTMQL YRVPGKSITL NAYNDKTDVI FSFVSDTEIA
YDYRNKEQQR QLILDQFAGQ SWRTAELLQE VQQSDNFYFV DFYQIKMPFW SKGRVALVGD
AAYCASPASG MGGSLAVSGA AALADALQKH DGNYALAFRD YNTNFRPFIE SVQAEAQQNL
STVFLPRTEA GIQQGNAQTT PFYG