Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_2108 |
Symbol | |
ID | 8725846 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 2549102 |
End bp | 2551054 |
Gene Length | 1953 bp |
Protein Length | 650 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | |
Product | glycoside hydrolase family 43 |
Protein accession | YP_003386942 |
Protein GI | 284037012 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000000141623 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCGTT ACTTTAGCTT ATTTCTTATC CTGAGCACCT TGCTCTCGGG AGCCCCAGCT GTCCATGCAC AGCAGACGTC CAACTACACC CAGGTCAACA CCTACGTCAA CCCGGTACTT CCCGGCGATC ATCCAGACCC AACCATGCTG CGCGTGGGGG ATGACTTTTA CCATTGCGGG TCGAGTTTTC ATTTCACGCC CTATCTGCCC ATCTATCATT CCAAAGACAT GGTGCATTGG GAGGTTATCA GCCGCGTAGT GCCGCCCACC GCTAGTTTTG TCTCCGACAG GCCTTCGGCG GGTATCTGGC AAGGGGCCAT TACCTATTTC TACGGGTCGT ACTGGATTTA CTTCTCGGCC AACGGGCAAT GGTTTTCCAA AGCCAGCAGC CCCAAAGGAC CGTGGTCGGA GCCGGTGCGG GTGAAAGGTG ATCCCAAAAC GGGGCCACTG GGCTACGACA ATTCGATCTT TGTCGACGAC GATGGCAAGC CGTACATGGT GATCAAGAAT GGTCAGAAAA CCAACCGATT GCAGGAGCTG GGACGGGATG GCCAGCTGAC GGCCTCGGCC ATTGATCTCG ACTGGGTCAA CGCCAAACTA CAATATAGCT GGGCGGAGGG GCCGGTGATG TGCAAGCGGA ATGGCTACTA CTACTATTTC CCGGCGGGCG ACGTGTCGGG CGGGCAATAT GCCATGCGGG GCAAAGCCCT CACCGCCGAC TCGACTCAAT GGGAACGGCT CGGCGATTTC TTCAAACCCA TCACCGATCC TAAAACGGGA TTCCGTCGGC CCAACCACAT TTCGGCCCCG ATTCAGTTGG CCGATGGCAC CTGGTGGACA ATTGGCCAAA GCTATGAAAA GCCGCTTGAA GGAGCCGATT GGTCGGGCAT GGGCAGGCAA ACGGGCCTGT ATCAGGTTAT TTGGGAAGGA GACCGTCCGT GGGGCCTAGC GCCCACCACC AAACCAGTGG CACGACCCAA TCTGCCCCAG TCGGGTATTC TGTGGCGAAG CGCACAGTCA GACCGGTTCG ATAGCGACGT GCTTTCGCCG AACTGGCATT TTTTGAGCAA ACGGGTAGCA GACCGGTATT CGTTGTCGGC GCGTAAAGGC TGGGTACGTC TCTCACCCGA CACCGCCCGT GTGCACCTGA TGCAGAAAGA AACGGATCAT TATTATACCG CCGTCACCCG TGTCGACCTC AACGCCGACG ATCCCGCTGC AAAAGCCGGT ATCTATTTGA CCAATGGCAA TCAGAAGGTG TTTGCCCAAC TCTACAGTGG GTTCGATACG GGTAAAAAGA TCGTTTTCAG ACTCGATACG GCCATCCGCA CGGTGCCCAA TTCAGTCGGC AGCGTTGTCT GGCTGAAAGT GGAACGGAAC GAGCACCAGC TGACCGGCTA CTACAGCCGT GATGGAACGA AATGGACCGC CGTTGGGCCT CCCATCAGTT CGGTAAGTCT GGACAAGGCC CAACCCAATT TCAATTCGTG GGTGGGTACC AGTATAGGTT TATTTGCCGA AGGCAAACCC GCCGACTTTG ATTTTTTCAT CTGTAAAGAC GGCTTTTCCA GCCTTCCGGC CGTGGGTTAC AGCAATTATT ATGGCGTCGA AAAAACAGGG GTCACTGCCG GGTCTGGCGT TACCAATGAC TCCAGTCAGG GCGGCTGGTT TATGCTGTCG GGCGTTGATT TAGGCATGGG TAACGACGCA GCTAAACAGG TTCAGCTCCA GGTATCGACT ACTATGGAAG GAACGCTTGA GCTATGGCTC GACGATTTAA GTAACGGGAA AAAGATCGCC ACCATCCCGT TTAAATCAAC TACTGGCAAA GCGACCTCGA AAACGGTAAG CCAATCCGTC AAAGGGGTTT CAGGGCATCA CGATGTCTTT GTGAAATTTC CAGCTGGAAA AGCTAATATC GTTACGGTGA AAGCGTTGCA ATTTCAAAAG TAG
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Protein sequence | MNRYFSLFLI LSTLLSGAPA VHAQQTSNYT QVNTYVNPVL PGDHPDPTML RVGDDFYHCG SSFHFTPYLP IYHSKDMVHW EVISRVVPPT ASFVSDRPSA GIWQGAITYF YGSYWIYFSA NGQWFSKASS PKGPWSEPVR VKGDPKTGPL GYDNSIFVDD DGKPYMVIKN GQKTNRLQEL GRDGQLTASA IDLDWVNAKL QYSWAEGPVM CKRNGYYYYF PAGDVSGGQY AMRGKALTAD STQWERLGDF FKPITDPKTG FRRPNHISAP IQLADGTWWT IGQSYEKPLE GADWSGMGRQ TGLYQVIWEG DRPWGLAPTT KPVARPNLPQ SGILWRSAQS DRFDSDVLSP NWHFLSKRVA DRYSLSARKG WVRLSPDTAR VHLMQKETDH YYTAVTRVDL NADDPAAKAG IYLTNGNQKV FAQLYSGFDT GKKIVFRLDT AIRTVPNSVG SVVWLKVERN EHQLTGYYSR DGTKWTAVGP PISSVSLDKA QPNFNSWVGT SIGLFAEGKP ADFDFFICKD GFSSLPAVGY SNYYGVEKTG VTAGSGVTND SSQGGWFMLS GVDLGMGNDA AKQVQLQVST TMEGTLELWL DDLSNGKKIA TIPFKSTTGK ATSKTVSQSV KGVSGHHDVF VKFPAGKANI VTVKALQFQK
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