Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_2076 |
Symbol | |
ID | 8725814 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 2503510 |
End bp | 2506734 |
Gene Length | 3225 bp |
Protein Length | 1074 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003386914 |
Protein GI | 284036984 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGATTAC TTGTAACAAC ATCAATAGCT GTATTATTCC TTTTTTGTGC TGGTTTGACG ACCTGGGCTC AGGTAACGAC CAGCGGACTT AGCGGTCGGA TCACTGACGC TAAAAATGAA GCACTTGTAG GCGCCACTGT TCAGGCAACT TACACGCCCA CCGGCACCAA ATATGCCGCC GTAACCGATG TGGAAGGACG CTACCGGATC AATAACATGA ATGCGGGTGG GCCTTACGAA CTAGTAGTAA CCTACGTTAG CTATAAAACC GAAACCCGTT CGGACATTAC GCTACAGCTT GGCGAAACGA CCAATTTGAA CATCACCCTT CAGGACGCCA GTACCCAACT CTCGGAGGTT GTAGTGAAAG CAAACCGGGA AGGCGAACGC CAGGGCGCGG GCATTAGTGT CAACAGCGAG ACGATTCGGC GGTTACCGAC CATCTCCCGC AGCCTGACCG ACATGACGCG GCTGACACCC CAGGTTAGTA ACAACAACTC CTTTGCGGGC ACCAACTTCC GCTACAACAA CGTCACCATC GACGGCGCTA TTAACAACGA CGCCATTGGA TTCAGCCCTT CGCTGGGTGG CTCAACGGGC ACTACGGGGC AACCTGGTTC CAGCACACGT ACCAACCCGG TTAGTCTGGA TGCTATTCAG GACATTCAGG TAGCCGTAGC TCCTTTTGAC GTTCGATTAG GTAACTTCCT GGGTGGTTCG GTCAATGCCG TTACCCGCAG CGGTACCAAC CAGGTAACGG GTTCTGTTTA CGGCTTTGGC CGTAATGCCG CCCTGACGGG TGCGTGGAAC GGTGCTTCCA ATGCCAAAGA GAAACTACCC AGCACCTTCC ACGAGTATCA GACGGGCGTT CGGGTCGGTT TTCCGCTGAT CAAGAACAAA CTGTTCTTCT TTACCAACGA AGAGATCACC CGTCGGCAGG ACCCCGTCCA GTTTCAGGCC GGTTCACCCA GTTCGCTCAT CAAAGATGCG GCACTGGCTC AGCAACTGAG CGATTTTGTG AAAGCCAATT ACGGTCTCGA TGCTGGCTCG TATGGTGACT ACGCCATATA CTCCAATAGC ACCAAGTTCT TCAACCGGCT GGACTGGAAC ATCAACGACA AAAACCAGTT GACCATCCGC AACAACACGG TTTTCTCGGA AGCGACTAAC CTGGAGCGCG ATGCGGCCAA CTTCCGCTTC GGTAGTATCG ACTTCAAACA GGTCAACAAC CAGAGCAGCA CCGTGGCCGA ACTAAAAAGC CAGTTCAGCG GCCGGGCGTC AAACAGTCTG ATTTTAGGGT ACTCCAGCAT CCACGACTAC CGCAATACGC TGTCCAACGT GCGCACGTTC CCCCAGGTTG AGATCGGCTA CAATGGCGGT ACCATCTTTC TGGGCAACGA CCGGGAGGCT TCCATTTTCA ACCTGCGTCA GAAAACCTTC GAGCTCACCG ACAACTTTAC CTTCTACCTG GGCAAAAACA CGTTTACGGT GGGTACGCAC AACGAGTTTT ACACCATCGA CTATGGCTTT GTCAACTCGC CCAATGGTCG GATTTCGTAC CGCAACCCGA CTGAATTCCT GGCTAAACTA CCCAACCGGG TTCGGGGTTC GTATCCCTTC GCCGATGGCA CCAACAACCT CGACAACCAG TTTAACAACC CCTATGCCCA CTTCAATGTC AACCTGCTCA GCTTCTATGT ACAGGATGAT ATTCAGGTAT CGGATCGGCT GAAACTGTCG CCGGGTGTGC GTCTGGACTA CACCGGCCTA CCCAATAAAC CAACGCTCAG TCCGCTGGTA ACCGGGTCGG CCGGCGACCC GACCAACCTG GGCCGAACCT ACAGCTTCAC CCCGCTTAAC CAGATCGCCA ATAGCTACCT CAACAACGTT CAGATTTCGC CCCGCCTTGG CTTCACCTTC GATGTCAATG GCGACAAGAG CCTGGTTGTT CGGGGGGGAA CAGGCCTGTT CACGGGCCGT ATTCCGTTTG CCTGGCTGGG CTATGCCTTC TACAATAATG GGGTAGGCTA TGGCGCGTAC GATTTCAACA ACAACGCAAC GGCCACGACG AAGCTGGTGG GTGATCCGCT CGTTGCGAAC GGCGGTCTGC TGATCAACAA CAACCCGGCC AACGGGGGCG TGACGCGTAC ACAGGTCGAT TTGATTGACA ACAACTTCAA GATGCCGCAG ATGTTCCGTA ACAATCTGGC CGTTGATTAT GTGGTAGGCG GCTATAAACT CACGGTAGAA GGCCTGTACA CAAAGGTGAT CCAGGACCTG AAATTTCAAC AGGTTAATAC GAAGGATGTG GTTCGGTACT ACAGCTACGA TACCCAGCAG CAACAGCCCA TTTATGTGGC CGCTAATGGC TCAGCGGGTG CACAGCGTAT CGACAACAAC TTTGCCAACG CTTATCTGCT CTCTAACACG AACAAGGGAT ACCGCTACAG CCTGACGGGA CAAATTCAGC GGAACTTCCC ATTCGGATTC GGCTTCTCAA CGGCTTATAC CTACGGCAAG TCGTTCGACC TGACCAACGG TATCCGCAAC TCGATGGAAT CGAACTGGCA GTTAAACCAG TCGCTGACGC CGAACGATCC GCAACTCTCG TACTCGAACT TCGATATCCG CCACCGCATT GTTGGTACCG TTAACTACCG CCAGGTCTGG AATCCCAGGA ATGCAACGAC GGTAACGCTG TTCTACTCGT TGCAATCGGG CACGCCTTTT TCGTGGGGCT ATGTTAACTC GACCATCGAT GGTACCGGAC AGGCTAACAG CTTAGCCTAT ATCCCCCGTG ACCTGACCGA AGCCCAGAAA CTGCTGCCAA CGGGTACCCA AGCCAGCGAC TTTATGGCGT TCGTTGAATC AGATTCGTAT CTGAAAACCC GAAAAGGAAA CTTCACCGAA CGCAATGCCG GTCGTACGCC CTGGAATAAC ACTATGGACC TGCGTTTCCT GCATGAGTTC AAGCTGAAAG GTCGTCAGTC GGTGCAGATC AGCTACGACA TCATCAACTT CCTGAACCTG CTGGATAAGA CCCTGGGGTA CTCTTACTTT TCACCCAACA CGTTCAATTC GACAGCTTCC ATTGGTCTGG CACGGGCCAC CAACCCAACC AGTGGCGACC CGACCTTTAC CTGGACGGCT CCATCAGCTC CCTACTCCAT CGATCCGCTG GGCTCACGCT GGCAGATGCA GCTTGGGGCG CGGTACTCTT TTTAG
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Protein sequence | MRLLVTTSIA VLFLFCAGLT TWAQVTTSGL SGRITDAKNE ALVGATVQAT YTPTGTKYAA VTDVEGRYRI NNMNAGGPYE LVVTYVSYKT ETRSDITLQL GETTNLNITL QDASTQLSEV VVKANREGER QGAGISVNSE TIRRLPTISR SLTDMTRLTP QVSNNNSFAG TNFRYNNVTI DGAINNDAIG FSPSLGGSTG TTGQPGSSTR TNPVSLDAIQ DIQVAVAPFD VRLGNFLGGS VNAVTRSGTN QVTGSVYGFG RNAALTGAWN GASNAKEKLP STFHEYQTGV RVGFPLIKNK LFFFTNEEIT RRQDPVQFQA GSPSSLIKDA ALAQQLSDFV KANYGLDAGS YGDYAIYSNS TKFFNRLDWN INDKNQLTIR NNTVFSEATN LERDAANFRF GSIDFKQVNN QSSTVAELKS QFSGRASNSL ILGYSSIHDY RNTLSNVRTF PQVEIGYNGG TIFLGNDREA SIFNLRQKTF ELTDNFTFYL GKNTFTVGTH NEFYTIDYGF VNSPNGRISY RNPTEFLAKL PNRVRGSYPF ADGTNNLDNQ FNNPYAHFNV NLLSFYVQDD IQVSDRLKLS PGVRLDYTGL PNKPTLSPLV TGSAGDPTNL GRTYSFTPLN QIANSYLNNV QISPRLGFTF DVNGDKSLVV RGGTGLFTGR IPFAWLGYAF YNNGVGYGAY DFNNNATATT KLVGDPLVAN GGLLINNNPA NGGVTRTQVD LIDNNFKMPQ MFRNNLAVDY VVGGYKLTVE GLYTKVIQDL KFQQVNTKDV VRYYSYDTQQ QQPIYVAANG SAGAQRIDNN FANAYLLSNT NKGYRYSLTG QIQRNFPFGF GFSTAYTYGK SFDLTNGIRN SMESNWQLNQ SLTPNDPQLS YSNFDIRHRI VGTVNYRQVW NPRNATTVTL FYSLQSGTPF SWGYVNSTID GTGQANSLAY IPRDLTEAQK LLPTGTQASD FMAFVESDSY LKTRKGNFTE RNAGRTPWNN TMDLRFLHEF KLKGRQSVQI SYDIINFLNL LDKTLGYSYF SPNTFNSTAS IGLARATNPT SGDPTFTWTA PSAPYSIDPL GSRWQMQLGA RYSF
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