| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_2043 |
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| Symbol | |
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| ID | 8725781 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | - |
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| Start bp | 2472073 |
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| End bp | 2473989 |
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| Gene Length | 1917 bp |
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| Protein Length | 638 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_003386887 |
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| Protein GI | 284036957 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0081773 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.454673 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCTAC CCCTTACCTA TTCCGACTGG CACCAGTACA GCCTGACTCA TCCGGAAGCG
TTCTGGGCAG AGCAAGCCAG GAATATTCCC TGGTTTACCC CGCCCACGCA AATTCTATCG
ACCGATGAAA ACGGCCTGAC GCGCTGGTTT GCGGATGGGC AGCTCAATAC CTGTTATGCC
GCTCTGGATT ACCACGTCGA GAATGGCCGG GCCGACCAGG TGGCCCTCAT TCATGATTCG
CCCGTTACAA ACACCATCCG GCAGTTTACT TACCGAGAAC TGCGCGATGA AGTGGCCCGG
CTGGCCGGCG TTTTGCAGAA ACTGGGCGTT ACAAAAGGCG ATACGGTCGT GATTTACATG
CCGATGATTC CCGAAACAGC CTTTGCCATG CTGGCCTGTG CCCGGCTGGG GGCTATTCAT
TCGGTCGTGT TCGGTGGTTT CGCACCCCAC GAACTGGCGC TGCGTATCGA CGATGCCCGC
CCCAAAGTTG TGCTGTCGGC ATCCTGTGGC ATTGAGTTTA CGACGATTAT TCCCTACAAG
CCCTTGTTGA ATGATGCCCT CCGGCAGGCC AGCTTCCAAC CCGAGCATTG TCTGATTTTG
CAGCGCCCGC AATGTGCCGC CGAGCTGCAA ATCGGCCGGG ATCACGACTG GCAGTTGCTG
GTCAGTCGGG CGCAACCCGC CGACTGTGTG CCCGTCAACG CGACCGACCC GCTCTATATT
TTGTATACGT CCGGTACTAC CGGCAAGCCA AAAGGGATCG TGCGCGACAA TGGCGGCCAT
GCCGTCGCTA TTAAATACAG CATGCAGGCC GTGTATAATC TACAGCCCGG ACAGGTGATG
TTTACCGCGT CTGATTTTGG CTGGGCGGTT GGGCATAGCT ATTCGGTTTA TGGGCCGCTG
CTTCAGGGTT GTACATCGGT TATTCTGGAA GGAAAACCCG TTCGAACGCC CGATGCCGGT
ACGTTCTGGC GGGTAGTACA GACCTACGGG GTCAATGTGT TGTTCACCGC GCCCACCGCT
TTTCGGGCCA TTAAAAAAGA AGATCCTGAG GCCGTACTCA GCCGTAACTA CGACCTGTCA
TCACTGCAAA GTGTATTCGT GGCCGGGGAG CGGTGCGACC CGCCAACCCT TCAATGGCTG
CAAGCTATCG TTCACGTGCC CGTCATCGAC CACTGGTGGC AAACCGAATC GGGCTGGCCT
ATGGTGGCAG ATCCGCTGGG AATCGAGGAG CTGCCGGTGA AACCCGGCTC GGCTACAAAG
CCCGTTTGTG GCTATGATTT ACAAATTCTG GATGAAGACG GGTACCAGCT AGGCCCAAAT
GAAATGGGAT TGGTTTGCCT GAAACTACCC CTTCCGCCCG GTTGCCTGCC ATCGCTCTGG
CAGGACGATG TGCGGTTCCG GGCTTCCTAC CTGAGCCGCT TCCCCGGTTA CTACCTGTCG
GGCGATGGCG GTTATGTTGA CGAAGATGGC TACGTCTTTA TCATGGGACG CGTCGACGAC
GTGATAAACG TAGCCGGACA CCGCTTGTCG ACCGGTGAAA TGGAAGAAAT AGTGAGCAGT
CATCCTGCGG TTGCCGAATG CGCCGTGGTA GGCATTGCCT GTCCGTTGCG GGGACAGCGC
CCCGTCGGTT TTATCGTTCT GAAAGACGGG TTTCAAATCC AGGAGACAAC CCTTGAAACG
GAATTGGTAA CGCTCATCCG CGATCAGATC GGAGCGGTCG CCTGTTTTCG AAATGCGCTG
ACGGTGAAAC GCTTACCCAA GACCCGGTCC GGTAAGATTC TCCGGAAGAT CATCCGGTAC
ATAGCGGATG GCGAAGCCTA CACAACCCCG GCTACTATTG ATGATCCACT GATTCTGAAC
GAGATAAAAG ACGCATTGCT CAGGCGCAGA ATCGGTCAGC CGTTCGAAAT TGATTGA
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| Protein sequence | MNLPLTYSDW HQYSLTHPEA FWAEQARNIP WFTPPTQILS TDENGLTRWF ADGQLNTCYA
ALDYHVENGR ADQVALIHDS PVTNTIRQFT YRELRDEVAR LAGVLQKLGV TKGDTVVIYM
PMIPETAFAM LACARLGAIH SVVFGGFAPH ELALRIDDAR PKVVLSASCG IEFTTIIPYK
PLLNDALRQA SFQPEHCLIL QRPQCAAELQ IGRDHDWQLL VSRAQPADCV PVNATDPLYI
LYTSGTTGKP KGIVRDNGGH AVAIKYSMQA VYNLQPGQVM FTASDFGWAV GHSYSVYGPL
LQGCTSVILE GKPVRTPDAG TFWRVVQTYG VNVLFTAPTA FRAIKKEDPE AVLSRNYDLS
SLQSVFVAGE RCDPPTLQWL QAIVHVPVID HWWQTESGWP MVADPLGIEE LPVKPGSATK
PVCGYDLQIL DEDGYQLGPN EMGLVCLKLP LPPGCLPSLW QDDVRFRASY LSRFPGYYLS
GDGGYVDEDG YVFIMGRVDD VINVAGHRLS TGEMEEIVSS HPAVAECAVV GIACPLRGQR
PVGFIVLKDG FQIQETTLET ELVTLIRDQI GAVACFRNAL TVKRLPKTRS GKILRKIIRY
IADGEAYTTP ATIDDPLILN EIKDALLRRR IGQPFEID
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