Gene Slin_2032 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_2032 
Symbol 
ID8725770 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp2455982 
End bp2456689 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content53% 
IMG OID 
ProductSilent information regulator protein Sir2 
Protein accessionYP_003386876 
Protein GI284036946 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.375007 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.693202 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTACTC GTAAAAAAAT AGTTGTTCTT TCGGGCGCGG GTATCAGTGC GGAAAGTGGC 
ATTCCAACGT TTCGCGCATC GGACGGGCTG TGGGAAAACC ACCGCATTGA AGATGTAGCC
ACCCCCGAAG CCTGGCATCG GAATCCGGCG CTGGTGCAGG ACTTTTACAA TCAGCGTCGC
AAACAGGCCC TGAGCGTTCA GCCCAATGCA GGCCATCTGG CTTTGGTAAA GCTGGAAGAG
AAATTCGACG TGACGGTCAT TACCCAGAAT GTAGATAACC TGCACGAAAA AGCCGGTTCG
TCGAAGGTGG TCCATTTGCA TGGCGAGTTA TTCAAATCCC GCTCAACGGT CGATGAGTCA
TTAATTTATG ACATTGAGGG GTGGGAGCTT AAAGATGGCG ATGTATGCGC CAAAGGCTCA
CAGCTCCGTC CGCACATTGT CTGGTTTGGC GAAGCCGTTC CCATGATGGA CATCGCGCTC
GACATTACCG AGCAAGCCGA TCTATTTATC GTTGTCGGCA CATCGCTCAA CGTCTATCCG
GCGGCCGGGC TGGTCTACGC TGTTCGGGAG GGCGTGCCGG TGTACGTTGT TGATCCCAGC
ATTCCCGACA TGCACAAAAA AAATAACGTC ACGTTCATTG CCGAACCGGC TACCATTGGC
CTAACCCAGC TTGCTGAGCA ACTCATCGCA GAAACAGATA ATGCCTGA
 
Protein sequence
MSTRKKIVVL SGAGISAESG IPTFRASDGL WENHRIEDVA TPEAWHRNPA LVQDFYNQRR 
KQALSVQPNA GHLALVKLEE KFDVTVITQN VDNLHEKAGS SKVVHLHGEL FKSRSTVDES
LIYDIEGWEL KDGDVCAKGS QLRPHIVWFG EAVPMMDIAL DITEQADLFI VVGTSLNVYP
AAGLVYAVRE GVPVYVVDPS IPDMHKKNNV TFIAEPATIG LTQLAEQLIA ETDNA