Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_1984 |
Symbol | |
ID | 8725722 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 2394048 |
End bp | 2395553 |
Gene Length | 1506 bp |
Protein Length | 501 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | |
Product | permease YjgP/YjgQ family protein |
Protein accession | YP_003386828 |
Protein GI | 284036898 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0000194355 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.0100498 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGAAAA TAGATAAATT AGTACTAGGC TCTTTTTGGG GGCCATTTTT TTTAACCCTG GGTGTCGTCA TCTTTATCTT CCTGATGCGG CTCCTGATGT TTTATATCGA CGAGTTCGTT TCCAAAGACC TCGATCTGGC TACGTTTGGC CGTCTGCTCT TCTACTTTGC CCTGTTAACG ATCCCGACGG CCCTTCCGCT GGCCGTACTC CTGTCCTCGC TGATGACGTT TGGTAATCTG GGCGAATTCT TCGAACTCAC TGCCCTGAAA AGCGCCGGAA TTTCTCTTAC CCGTGCCATG CGCCCTCTGC TCATCGTTGC CATTGGTATC AGCGCGTTTT CGTTCTGGTT CAACAACTCG GTAGCTCCCT GGGCTAATCT TAAAGGATAC AGTCTGCTCT ACGATATCAA AACCGCTAAG GCTACCCTGA ACCTAAAGGA AGGAATCTTT TACAATGACC TGCCCGGATA CAGTATTAAA GTCGACCGAA AAATAAAAGC TGAAAAGGGG AGTACAACCG GCGATCTGCT CAAGGGATTG GTTATCTACA AACACCCTAC CAGCGGACTG GAAACGGGGA ATCGCGAGAT TATCCTGGCC GATTCTGGTC GTATGTATAC GGATAAAGAT CGAACCTACC TTGTTTTCCA GCTTTTCAAC GGCAACGATT ATCAGGAGTA TTCCGATAAT AGCATCAGTT ACGCCAGCAG TGGGCCAACG GCCCAGGGCG CACAGTTTAT GCGCAATGGG TTTAAAGACT ATAAACTCGT GATTAGCCTG GAATCATTCG GCATCAAACG AACGGATGAG AATCAGTTCG AATACCACGA ATACATGAAA GACCTCAAGC AACTCTCGGC CCTGACCGAT TCGCTGCGGA AGGACTACAA GAATACCAGC CTGAGCGTAG CCGGTGCATC ACGGCAGTAT TATAACTATC AGTTTAAATC CGACGCCGTC CTGAAGCAGA AGGTACTGAA AGATGGAAAA TGGGCGGATT CACTATTGAC TGCGCAAAAA ATACCGCAGC ATGAACTGGC TCAGATTGCC TTGAATCAGG CTCAGAATAT TCTGTCTTAT TCTACCTCGA ATGTGACCTA TCTGACCGAA AAAGAAAAAA ATGTCTGGCG TTACCAACTC GAAACTCATC ATAAATTTAC CCAGGCTATT TCCGTCTTTG TGATGTTCCT GATTGGCGCA TCGATGGGGG CCATTATCAA GAAAGGGGGC TTCGGTCTGC CGGTGCTTAT CGCCATTGTC TTTTTTATAT TTCTGTACGT GCTGACCATT GCGGGCGACA AGTATGCCAA GGACGGTTTG CTTTGGGTAC CCATTGGTGC CTGGCTGGCG AATATCGTCT TGTTTCCGTT TGGTCTACTA CTCATGCAGC GGGCCCGGCA CGATTCCCGG CTGTTCGATA AAGATGTATA TGTTATTGCC TGGGAACGGT TCCGGAAACG GTTTGATAAA AACGCCAGGG AAGTGCAAGT GCAGACGGCG GAGTAA
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Protein sequence | MKKIDKLVLG SFWGPFFLTL GVVIFIFLMR LLMFYIDEFV SKDLDLATFG RLLFYFALLT IPTALPLAVL LSSLMTFGNL GEFFELTALK SAGISLTRAM RPLLIVAIGI SAFSFWFNNS VAPWANLKGY SLLYDIKTAK ATLNLKEGIF YNDLPGYSIK VDRKIKAEKG STTGDLLKGL VIYKHPTSGL ETGNREIILA DSGRMYTDKD RTYLVFQLFN GNDYQEYSDN SISYASSGPT AQGAQFMRNG FKDYKLVISL ESFGIKRTDE NQFEYHEYMK DLKQLSALTD SLRKDYKNTS LSVAGASRQY YNYQFKSDAV LKQKVLKDGK WADSLLTAQK IPQHELAQIA LNQAQNILSY STSNVTYLTE KEKNVWRYQL ETHHKFTQAI SVFVMFLIGA SMGAIIKKGG FGLPVLIAIV FFIFLYVLTI AGDKYAKDGL LWVPIGAWLA NIVLFPFGLL LMQRARHDSR LFDKDVYVIA WERFRKRFDK NAREVQVQTA E
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