Gene Slin_1952 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1952 
Symbol 
ID8725689 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp2362717 
End bp2363292 
Gene Length576 bp 
Protein Length191 aa 
Translation table11 
GC content53% 
IMG OID 
Productacetyltransferase 
Protein accessionYP_003386796 
Protein GI284036866 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.582602 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.324618 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGACC CAACAAATCA AAACACTATT TTTCAGCGGA TGCAGGCGGG AGAGCCGCTG 
CGTAAGGATG ACCCGGAGTA TGCCCGGTTT GGCGAAGCAG TGGCGCGCAC CATCCAACTG
GTAACCGAAA TGAATGCTTC CGCTCAGGGT GTCGACGAGG TCAGAGGGCG ACTGAGTGAG
ATCACCGGCA CAGAGATAGA CTCATCTACC ACGGTATTTC CCCCTTTTTA CACCAATTTT
GGCCGGTTTA TCAGGCTGGG GAAAAACGTG TTTATCAACC ATGCGTGCTC GTTCCTGGAT
TTATGTACCA TCACTATCGA GGATAATGTA CAGATCGGGC CCAAAGTCAA CCTGATCACC
GAGAACCATC CGCTGGATCC TAGTGACCGG ACAACTGTTC TGCTCAAACC GATTGTGGTG
AAACGCAACG CCTGGATTGG TGCTGGAGCA ACTATTCTGC CGGGGGTGAC CATTGGCGAA
AACTCAATTG TCGCTGCGGG TGCCGTAGTG AGTCGGGATG TGCCCGCCAA TACGGTTGTG
GCGGGTGTTC CGGCCAAGGT GGTCAAAACG CTTTGA
 
Protein sequence
MSDPTNQNTI FQRMQAGEPL RKDDPEYARF GEAVARTIQL VTEMNASAQG VDEVRGRLSE 
ITGTEIDSST TVFPPFYTNF GRFIRLGKNV FINHACSFLD LCTITIEDNV QIGPKVNLIT
ENHPLDPSDR TTVLLKPIVV KRNAWIGAGA TILPGVTIGE NSIVAAGAVV SRDVPANTVV
AGVPAKVVKT L