| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_1927 |
|---|
| Symbol | |
|---|
| ID | 8725664 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | + |
|---|
| Start bp | 2334565 |
|---|
| End bp | 2335125 |
|---|
| Gene Length | 561 bp |
|---|
| Protein Length | 186 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | |
|---|
| Product | CMP/dCMP deaminase zinc-binding protein |
|---|
| Protein accession | YP_003386771 |
|---|
| Protein GI | 284036841 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTACCAA CCACCGATAA ACCTGTTTTG ACTACTGACG TTAGTACGGC TCCGTCTGTC
AAGCCGCGCT TTGATGATAT TTTCATGGAT CTGGCCGTTA ATCTGGCCAA ACGCTCGCAT
TGCATCAAGG CGCAGGTAGG AGCGGTGCTG ACCCGCGACA CCCGCATTAT CTCCATTGGC
TACAATGGTC CTCCTGCGGG TACGCACAAC TGCGACGAGG AATTTCCCGG CGTTGGGTGC
CCCCGCGATT CAAAAGGGTC CTGTTCACTG GCACTTCATG CCGAGCAGAA TGCCATTCTC
TATGCCGCCA AAAATGGCTC AGAGATCGAA GGGTCTACGA TATACGTAAC CCTGTCGCCC
TGCATTGCCT GCGCCCGGAT TATCTACAGC ATGAAAATTG CCCGAGTCGT TTTCCTAAAT
TCCTACGCCG AATACAAGGG AATCCCTTCC GACGAGGGCG TTGATTTTCT GCGTCGGTTT
GGCGTAACGG TCGAACGGTA TGTGTCCAGT TCAGGGGCCA GTGTCGGGGC TGATTTGCCC
ATTACTCAAC CAACGCCATG A
|
|---|
| Protein sequence | MLPTTDKPVL TTDVSTAPSV KPRFDDIFMD LAVNLAKRSH CIKAQVGAVL TRDTRIISIG
YNGPPAGTHN CDEEFPGVGC PRDSKGSCSL ALHAEQNAIL YAAKNGSEIE GSTIYVTLSP
CIACARIIYS MKIARVVFLN SYAEYKGIPS DEGVDFLRRF GVTVERYVSS SGASVGADLP
ITQPTP
|
|---|
| |