Gene Slin_1899 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1899 
Symbol 
ID8725636 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp2294822 
End bp2295838 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content50% 
IMG OID 
ProductBile acid:sodium symporter 
Protein accessionYP_003386743 
Protein GI284036813 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAAAG CTACATTAGG TTCCCTTTTG GCCCGTGTTG GGCTCGACTG GTTCATTCTT 
GCTCTGTTGG CTATGATTGG GCTGGCCAAA TTCTGGCCCG AACCCGGCAT TCAGGAAGGC
CCGTTTTCGC TGTCGGCGCT GGCCAATTAT GGCGTTACGA TGATTTTCTT TTTCTATGGA
CTTCGCCTGA ATTTCGACCA GCTAAAGGAA GGGTTGCGTA ACTATCGGCT GCATTTACTC
ATTCATTCGT CCACCTTTAT TGTCTTCCCC GCCGTTGTGC TGGCAGCGCG TTCGTTTTTT
ATGACGCCTG ATACCGAATT ACTCTGGCTG GGCATTTTCT ACGTAGCAGC CTTGCCCTCT
ACGGTGTCGT CATCTATTGT GATGGTTTCC ATTGCTCAGG GCAACATTCC GGCTGCTATC
TTCAACGCCA GTATCTCCAG CCTGATTGGC GTGTTTATTA CTCCGCTCTG GATGAGCTAT
CTGCTGACCA GTACCAATGG CCAGTACGAC CTCAATAGTG TGATTGGGAA ACTGACAATT
CAGGTCATTG TTCCTGTCAT ACTGGGTCTG CTACTGAATC GGCGGCTGGG TTGGTTTGCC
GAACGACATA AATCGTCTCT GCGCTACTTC GACCAGCTGA CTATTCTGTT GATCGTCTAT
ACGGCATTTT GTGAATCGTT TTCGCTCAAC TTGTTCGCCA GCTACTCAGC AGCTGACCTA
CTCGAACTGG CGGGTATGAT GCTGGGCTTG TTCTTACTTA TTTTCGGCTT TATTCACCTC
GTCAGTCGTT TGTTGAATTT TAACCGGGAA GACCGCATTA CGGCCTTGTT CTGCGGTTCT
AAAAAATCGC TGGTGCAGGG CAGCGTTATG GCCAATGTAC TGTTTCCGGG CAACATTGCC
GGGGTTGTGC TGCTGCCCAT TATGGTATAC CACGCCCTAC AGCTGATTGT GGCCAGTATC
ATTGCTCAGG GCATGGCCCA CCGGCAGGAA GAAAAAGAAA AGGCCATTCA GGCGTAA
 
Protein sequence
MAKATLGSLL ARVGLDWFIL ALLAMIGLAK FWPEPGIQEG PFSLSALANY GVTMIFFFYG 
LRLNFDQLKE GLRNYRLHLL IHSSTFIVFP AVVLAARSFF MTPDTELLWL GIFYVAALPS
TVSSSIVMVS IAQGNIPAAI FNASISSLIG VFITPLWMSY LLTSTNGQYD LNSVIGKLTI
QVIVPVILGL LLNRRLGWFA ERHKSSLRYF DQLTILLIVY TAFCESFSLN LFASYSAADL
LELAGMMLGL FLLIFGFIHL VSRLLNFNRE DRITALFCGS KKSLVQGSVM ANVLFPGNIA
GVVLLPIMVY HALQLIVASI IAQGMAHRQE EKEKAIQA