| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_1834 |
|---|
| Symbol | |
|---|
| ID | 8725571 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | - |
|---|
| Start bp | 2213086 |
|---|
| End bp | 2215890 |
|---|
| Gene Length | 2805 bp |
|---|
| Protein Length | 934 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | |
|---|
| Product | peptidase M16 domain protein |
|---|
| Protein accession | YP_003386678 |
|---|
| Protein GI | 284036748 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.106959 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 0.617697 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAAGCA ACCTTACCAA AAGAGGTTTG TTGGCCGCTG CCTGGTTCAT AAGTAACCTG
ACACTTTCAA CGGCTCAGGA TAAACCCGCA GCGTTGCCCG AAGGCGTAAC AAAAGGTGCT
TCCGTAGAAG GCATCACGGA ATACAACCTC AAGAATGGGT TGAAGGTCCT GCTCTTCCCC
GACCCCTCGA AACCCACCAT CACGGTAAAC ATTACCTATT TAGTAGGCTC GCGGCACGAA
GGCCTGGGGG AAACCGGAAT GGCCCACCTG CTGGAGCACA TGGTATTTAA AGGGTCGACA
AAGCACACGA ACATTCCCGG GGAGCTGACC TCACACGGAG CCCGGCCCAA CGGTACCACC
TGGCTCGACC GTACCAACTA TTTCGAAACC TTTGCCGCTA CGGACGAGAA CCTCAAGTGG
GCGCTCGACC TGGAATCAGA CCGGATGGTG AACTCGTTCA TCAAAAAGGA AGACCTCGCA
ACCGAGTTCT CCGTCGTTCG GAATGAGTTT GAAATGGGTG AGAACTCGCC CCAGAATGTA
CTGAATGAGC GGGTTGTCTC ATCAGCTTAC CTCTGGCACA ACTACGGTAA CTCGACCATC
GGCAACCGCT CCGATATTGA GAAGGTGCCC ATCGGCAATC TTCAGGCTTT TTATAAGAAG
TTCTACCAGC CCGACAACGC CGTGCTGGTC GTAGCCGGTA AAATCGACGA GCCGAAAACC
CTCGCGATGA TCAATCAATA TTTTGGCGCT ATTCCACGTC CGGCGCGTGT ACTTCAGCCT
ACCTATAGCC AGGAGCCTAC CCAGGATGGC GAACGGATGG TAACGCTCCG GCGCGTCGGC
GATACCAAAG TAGTATCGGC GCTGTACCAC ATCATGCCCG GCTCCCACCC CGACTATCCG
ACAATGGACG TGGTAACGGA ACTGCTCACC AACGAGCCAT CGGGCCGACT CTATAAAGCC
CTGATCGAAA CCAAGAAAGC CTCGCAGCAA TACGGCTACT CATTCACGAC TAAAGACCCC
GGCTACGTGT ACTTTGCCGC CGAGATGTTG AAAGACAAAT CACTGGATGA TGCCAAAAAC
GCCCTGCTGT CGACGCTCGA TTCGGTTGCC ATCAAAACCC CGTCGAAAGA AGAAATCGAC
CGCGCTAAGG TCAAGATCCT GAAAGACCTG GAGTTGAGCT TCAAAAGCGC CGAACGCGTG
GGACTTGCGT TGAGCGAGTA CATTGCAACG GGCGACTGGC GGCTTGGTTT CCTCTACCGG
GATGCCCTCG AAAAAGTAAC CCCGGCCGAT GTTAAGCGTG TGGCCAGCTA TTATTTCAAA
CCTTCGAACC GTACCGTTGG TGTGTTCATT CCGGAGCAGA ACCCAGACCG GGTGGAGGTT
CCGCAGGCCC CCGACATTAT GGCGATGGTA AAAGATTATA AAGGCCGGGC TCTGGTAGCA
CAAGGGGAAG CGTTTGATCC CTCCCCCGCC AACATCGACG GCCGTACCCG CCGTTTGGAG
CAGCCCAATA CGATTGAGCT GGCCATGCTC CCGAAAACGA CGCGTGGTAA CGAGGTAAAC
GCCCGCCTGA CACTCCGCTA CGGCGATCAG AAAAGCCTGA TGAACAAGAG TGCCATCTCG
GTGTTCACGG CGTCGATGCT TGACCGGGGC ACCACGACTC GCAGCCGCCA GCAGATTAAA
GACGAACTGG ACAAACTAAA GGCGCAGGTG GGTGTGTTTG GGGGTGGTAA CCAGGTGAAC
GTAAGCATCA AAACAACCAA AGAAAACCTC CCCGCTGTTA TTCGGCTGGT GAGCGACATG
CTCAAGCACC CGGCTTTCGA CGCCAATGAG TTCGAAAAGC TAAAGCAGGA ACAACTGGCT
CAGATTGAAG CCCAGCGCTC TGAGCCCCAA TCATTGGCGT TCACCGCGTT CCAGCGTCAG
ATGAACCCTT ACCCCAAAGA GGATATTCGG TATACCTCAA CGCCCGATGA AGATGTTGCC
GACGTTAACG CGCTGAAACT GGACGACCTG AAACAGTTTC ACAAGGATTT CTACGGTGCC
CAGAATGCAA CGCTGGCCGT AGTAGGCGAT TTTGAGGAGA CGCCCGTTCG GAAAGTGGTT
ACGGATGAGC TAGGTACCTG GAAAGCCAAA AAGCCGTTCA GCCGGTTGGT GACCCCGTTT
AATGATATTA AGCCAACCCC GCAAAGCATC GAAGCGCCCG ATAAAGCCAA TGCCTTTATG
GTAGCCGGTG TTAACATCCC GTTGCGCGAC GATGACCCAG ACTATCCGGC GCTTATGCTG
GGCAACTACA TGCTGGGCGG TGGCTTCCTG AACTCCCGGC TGGCCGTTCG TATCCGGCAG
AAAGAGGGTA TCAGCTATGG CGTTGGCTCG CAATTATCAG CCAACCCACT CGACAAAACG
GGAATGTTCA TGACCTATGC CATCTACAAC CCCGAGAATG CCGAACGGCT GGAAAAAGCC
TTTCGTGAGG AGATGGACAA AGTAGTGAAA GAAGGCTTTA CCGCCGAAGA AATACAAGCC
GCTCGTTCAG GTTATCTGCA ATCACGGATG GTGTCGCGGG CGCAGGACCC TTCGCTGGTC
GGTACTCTCA ACAACTACCT GTACCTGAAT CGGACAATGA ATTGGGATGC CGATTTCGAG
AAGAAAATGG AAAGCCTGAC ACCCGAGCAG GTCAATGCCG CTATGAAAAA ACACATCGAC
CCATCGAAAA TCTCCATCAT CAAAGCGGGC GATTTTGCGA AGGCTGCTAA GAAAACCGCT
GATAAACAGC CCGCTTCATC GGTAAGTGGC GGAGCGAAAA ATTAA
|
|---|
| Protein sequence | MTSNLTKRGL LAAAWFISNL TLSTAQDKPA ALPEGVTKGA SVEGITEYNL KNGLKVLLFP
DPSKPTITVN ITYLVGSRHE GLGETGMAHL LEHMVFKGST KHTNIPGELT SHGARPNGTT
WLDRTNYFET FAATDENLKW ALDLESDRMV NSFIKKEDLA TEFSVVRNEF EMGENSPQNV
LNERVVSSAY LWHNYGNSTI GNRSDIEKVP IGNLQAFYKK FYQPDNAVLV VAGKIDEPKT
LAMINQYFGA IPRPARVLQP TYSQEPTQDG ERMVTLRRVG DTKVVSALYH IMPGSHPDYP
TMDVVTELLT NEPSGRLYKA LIETKKASQQ YGYSFTTKDP GYVYFAAEML KDKSLDDAKN
ALLSTLDSVA IKTPSKEEID RAKVKILKDL ELSFKSAERV GLALSEYIAT GDWRLGFLYR
DALEKVTPAD VKRVASYYFK PSNRTVGVFI PEQNPDRVEV PQAPDIMAMV KDYKGRALVA
QGEAFDPSPA NIDGRTRRLE QPNTIELAML PKTTRGNEVN ARLTLRYGDQ KSLMNKSAIS
VFTASMLDRG TTTRSRQQIK DELDKLKAQV GVFGGGNQVN VSIKTTKENL PAVIRLVSDM
LKHPAFDANE FEKLKQEQLA QIEAQRSEPQ SLAFTAFQRQ MNPYPKEDIR YTSTPDEDVA
DVNALKLDDL KQFHKDFYGA QNATLAVVGD FEETPVRKVV TDELGTWKAK KPFSRLVTPF
NDIKPTPQSI EAPDKANAFM VAGVNIPLRD DDPDYPALML GNYMLGGGFL NSRLAVRIRQ
KEGISYGVGS QLSANPLDKT GMFMTYAIYN PENAERLEKA FREEMDKVVK EGFTAEEIQA
ARSGYLQSRM VSRAQDPSLV GTLNNYLYLN RTMNWDADFE KKMESLTPEQ VNAAMKKHID
PSKISIIKAG DFAKAAKKTA DKQPASSVSG GAKN
|
|---|
| |