Gene Slin_1785 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1785 
Symbol 
ID8725522 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp2158115 
End bp2159299 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content56% 
IMG OID 
Productaminotransferase class V 
Protein accessionYP_003386629 
Protein GI284036699 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.895354 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.926046 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTGACC TTTCTACCCT GCGGGCAGAT ACCCCCGGCA TTCGACACGT TAGCCATTTT 
AACAATGCCG GTGCTTCGCT CATGCCGCAG CCGGTGATCG ACGCCATCAC CCGTCATATA
CATCTGGAAG CGGAAATAGG CGGTTACGAA GCCGCCGAAG CCCAAAAGGA AGCTATTCAG
GGGTTTTATA CCGCCACGGC TGATCTGCTG AACACCACGG CCGACCATAT TGCGGCAACG
GCCAATGCGA CCGACTCCTA CGCCCGCGCC TTATCTTCGA TTCCGTTTCG GCAGGGCGAT
GTAATTCTCA CAACCATCAA CGATTACGTA TCCAACCAGA TCGCTTTTCT CTCATTACAA
AAACGGTTTG GGGTCCAGAT TGTGCGGGCG GCTGATGAGG TCAGTGGGGG CGTATCAGTG
GCTGATATGG CCTATAAAAT TAAATCCCTG CACCCGCGAC TGGTGGCCGT TACGCACGTG
CCGACGAACT CCGGTCTGGT GCAGCCGGTC GAAGCCATCG GGCAGCTTTG CCGGGAAAAT
GATGTACTTT ATCTGGTGGA TGCCTGCCAG TCGGTGGGGC AGTTGCCCGT TGATGTGCGC
CGGATTCAGT GTGATTTCCT GACCGCTACC TGTCGGAAGT TTTTGCGCGG ACCGCGGGGC
ATGGGGTTTC TGTACGTGTC GGAAAAGGTG CTGGCCGCCA ACATGGCACC CCTGTTCATT
GACCTGCACG GGGCCGAATG GGAATCGGCA GATGCGTATC GGCTGGAGCC GACAGCAAAG
CGGTTCGAGG ATTGGGAGTT TCCGTATGCA CTGGTGCTGG GCGCTGCCGA GGCCCATCGC
TACGCCCTTA AAGTTGGGCT GGATGCGATT GCCGAACGAA ATGTTGCTCT GTGTGCCACG
TTACGCACGC AATTGGCCCT GTTACCGGGT GTCCGGTTGC TGGACGAAGG TGCACAGCTC
TCCAGTATTA TTATCTTATA CAGTGAACAC AAAGCCGCAG CTGAGTTAAA AGCCGCTTTG
GCTGGCAAGC GCATCAATAC GTCGATCAGT ACGCACGGGG CTGCCATTCT GGACTATACC
CGAAAAGGCA TGTTAACGGC CGCCCTTCGC ATTTCTCCCC ATTATTTTAA TACCGACGAA
GAAATTGCCG GGCTGGTTGA TACCCTGCAC CACGCGCTCA AATGA
 
Protein sequence
MLDLSTLRAD TPGIRHVSHF NNAGASLMPQ PVIDAITRHI HLEAEIGGYE AAEAQKEAIQ 
GFYTATADLL NTTADHIAAT ANATDSYARA LSSIPFRQGD VILTTINDYV SNQIAFLSLQ
KRFGVQIVRA ADEVSGGVSV ADMAYKIKSL HPRLVAVTHV PTNSGLVQPV EAIGQLCREN
DVLYLVDACQ SVGQLPVDVR RIQCDFLTAT CRKFLRGPRG MGFLYVSEKV LAANMAPLFI
DLHGAEWESA DAYRLEPTAK RFEDWEFPYA LVLGAAEAHR YALKVGLDAI AERNVALCAT
LRTQLALLPG VRLLDEGAQL SSIIILYSEH KAAAELKAAL AGKRINTSIS THGAAILDYT
RKGMLTAALR ISPHYFNTDE EIAGLVDTLH HALK