Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_1747 |
Symbol | |
ID | 8725484 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 2101105 |
End bp | 2103441 |
Gene Length | 2337 bp |
Protein Length | 778 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | |
Product | glycoside hydrolase family 65 central catalytic |
Protein accession | YP_003386591 |
Protein GI | 284036661 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAATT ATATAACTCA GGACCCCTGG AATATTGTTG AAGACGGGTT TCACCCCGAT TTTAATGAAA TTACGGAAAG TGTGATGTCG CTCGGCAATG GCCGGCTTGG TCAGCGGGGG AACTTTGAAG AGAAATTCAC CGGTAAATCC CTACAGGGCA ATTATGTAGC GGGGGTGTAT TACCCCGATA AAACAAGGGT GGGCTGGTGG AAAAATGGCT ATCCTGAATA CTTCGCTAAA GTGCTCAATG CCGCTAACTG GATTGGTATC GACATTGATA TTGACTACGA AAGTCTGGAT CTCAACCACT GCGAGGTCCG CAATTTTCGC CGGGTGCTCA ACATGCAGGA GGGATACCTC GAACGCTCGT TTGTGGCCGT ACTCAAAAGC GGTAAAGAGA TTCAGGTGAA TGCCAAACGC TTCTGCTCCA TTGTTGACGA CGAAGCTGGT GCCATTCGCT ACGCTATCAA ACCCCTGAAC TTCGAGGCCA AGATTACCAT TACGCCCTAC ATCAACGGCG ATATTCGTAA CCGCGATGCC AATTACGACG AAACATTCTG GGATGAAGTT CGAAAAGAAA CGGGTTATGG CGAAGCGTAT ATCGAACTCC GCACCCGTAA AACGGGCTTT CATGTCGCTA CCGGCATGTG CGTTGAAATC GAGCAGGATG GCGTAAAGGT CGACTATCAG TCGCAGCCCA TAAAGTACGA AAAGTACGTG GCTAACCGGA TGACACTCGA CTGCCGGAAG GGGCAGGAAA CGGTTATTTA TAAATATGCC GTAAACCTCT CGTCGCTCAA CTATGACCCC GATACGATCA TAAAGGATGC GCATCAGTAC ATCCAGCGGA TTACCCGGAA GGGGTTCGAA AAAATGCTGT TCGAGCAGAA ACAGGCCTGG GCCGACAAAT GGAAAACCAA CGATATCATT ATTGAGGGTG ATATTGCCGC TCAGCAGGGC ATTCGGTTCA ATATATTTCA GCTGAACCAG ACCTATACGG GCGAAGATGA GCGATTGAAC ATTGGGCCGA AAGGGTTTAC GGGCGAAAAA TACGGCGGGT CGACCTACTG GGATACCGAA GCCTACTGCC TGCCGTTTTA CCTCGCTACC GCCGACCAGA AAGTGGCGAA AAACCTGCTG GTTTACCGCT ACAAGCAACT GGGTAAAGCC ATCGAGAATG CGCAGAAACT CGGATTCCGG GCCGGGGCGG CTTTGTACCC CATGGTAACC ATGAACGGCG AAGAGTGTCA TAACGAATGG GAAATTACCT TTGAGGAAAT CCACCGCAAT GGCGCTATTG CCTATGCCAT CTTCGACTAC GTTCGCTACA CCGGCGATGA GCAGTATCTG GTCGATTATG GCCTCGAAGT CCTCATTGCC ATCAGCCGGT TCTGGAGCCA GCGGGTCAAC TGGTCGAAGG AGAAAGAGAA GTACGTAATG CTGGGCGTTA CCGGACCCAA CGAGTACGAA AACAACGTCA ACAACAACTG GTACACGAAC TATATTGCCG CCTGGACGCT CCGGTACACC ACCGAAGCCG TGGCCAGAGT GAAAGCGCTC GATTCAGATA AATACGCGGA CCTGATTGAC CGGATTCACT TCCGCGAAGA TAAGGAACTG GCCACGGCCC GGCAGATTAT TGATAAGATG TACCTGCCTG CTGATGCTGA AAAAGGCGTT TTCCTGCAGC AGGAAGGCTT TTTGGATAAG GACCTGATGC CCGTTTCGGA CATTCCGAAG GGACAGCGGC CCATCAACCA GAACTGGTCG TGGGACCGTA TTCTGCGGTC GTGCTTCATC AAGCAGGCCG ATGTATTGCA GGGACTTTAT TTCTTCGAAG ACGAGTTCGA CACGGAGACC CTGCGCCGGA ATTTCGATTT CTACGAGCCG ATGACGGTGC ATGAATCGTC GCTCTCGCCC TGCGTTCACT CCATTCAGGC CTCGAAACTG GGCATGAAAG AGAAGGCCTA TGAAATGTAC CTGCGAACCG CCCGGCTTGA CCTCGACGAC TATAACAACG ATACGGAAGA CGGGTGCCAC ATTACAAGCA TGGCCGGTAC GTGGCTGGCG GTTGTAAAAG GATTCGGTGG TTTGCGAATT GAACAGGCCG ACGGGGCCGA GCCTCGGGTC GTTCTGAACC CTTACTGCCC GGATAACTGG CAGTCGCTGG CGTTTAAAAT CCGGTACCGG GGCGTACTCT TGCAGGTAAC AACCACGCAG CAGGATGTTA CGGTGGAAAA TTTCTCGGCA CAACCCATCA CAATACACCT TCTTGGTGAA CAAGTGGTAA TTGGTGCCGA GAGTCAGCAG ACCGTGTCTG TGAAAATAGA AGCCTAA
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Protein sequence | MKNYITQDPW NIVEDGFHPD FNEITESVMS LGNGRLGQRG NFEEKFTGKS LQGNYVAGVY YPDKTRVGWW KNGYPEYFAK VLNAANWIGI DIDIDYESLD LNHCEVRNFR RVLNMQEGYL ERSFVAVLKS GKEIQVNAKR FCSIVDDEAG AIRYAIKPLN FEAKITITPY INGDIRNRDA NYDETFWDEV RKETGYGEAY IELRTRKTGF HVATGMCVEI EQDGVKVDYQ SQPIKYEKYV ANRMTLDCRK GQETVIYKYA VNLSSLNYDP DTIIKDAHQY IQRITRKGFE KMLFEQKQAW ADKWKTNDII IEGDIAAQQG IRFNIFQLNQ TYTGEDERLN IGPKGFTGEK YGGSTYWDTE AYCLPFYLAT ADQKVAKNLL VYRYKQLGKA IENAQKLGFR AGAALYPMVT MNGEECHNEW EITFEEIHRN GAIAYAIFDY VRYTGDEQYL VDYGLEVLIA ISRFWSQRVN WSKEKEKYVM LGVTGPNEYE NNVNNNWYTN YIAAWTLRYT TEAVARVKAL DSDKYADLID RIHFREDKEL ATARQIIDKM YLPADAEKGV FLQQEGFLDK DLMPVSDIPK GQRPINQNWS WDRILRSCFI KQADVLQGLY FFEDEFDTET LRRNFDFYEP MTVHESSLSP CVHSIQASKL GMKEKAYEMY LRTARLDLDD YNNDTEDGCH ITSMAGTWLA VVKGFGGLRI EQADGAEPRV VLNPYCPDNW QSLAFKIRYR GVLLQVTTTQ QDVTVENFSA QPITIHLLGE QVVIGAESQQ TVSVKIEA
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