Gene Slin_1650 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1650 
Symbol 
ID8725385 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp1982888 
End bp1984561 
Gene Length1674 bp 
Protein Length557 aa 
Translation table11 
GC content55% 
IMG OID 
Productpeptidase S8/S53 subtilisin kexin sedolisin 
Protein accessionYP_003386496 
Protein GI284036566 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.920736 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATTCG GCAAATCTAT CGCATTCAAA CATATGGGAA GGAATAAGAT AAGTTATCTT 
GTCGGCGTAC TCTTGTTCTG CCAGTTAACG GGTTTTGGGC AATCGACCCG TAAATTTTTG
GTTCTCCTGC GCGACAAAGC GAACTCGCCC TACAGTATAA GCCGTCCGGA GCAATTTCTA
TCACAACGGT CTATTCTGCG TCGGCAAAAG CAGAACATCG GTATTCTGGA ACGAGACCTG
CCCGTTAATC CGGCTTATGT GTCGCAACTT CAGCAGGCGG GGGCCAAAGT CTGGTTTACC
TCCCGCTGGC TCAACGCGGC CCTGGTTGAG GCCACCGACG CTACGATAGC CAGCGTTCAG
AGTCTCCCTA TTGTAAAAGG ACTTGAATTT GGCCGGTCGC TGGCCAATGC ACGAGTCAGT
GCAGCGAATC AGGTGTCTGC TCCGAAAAAA GTTACTACTA TTAACACGCT GGCAGACGCG
CCACTGGAGT ATGGCAATTC ACAAACGCAG ATAACCCAGT TAGGAGCTGA CATCATGCAC
CAGCAGGGGT ATCATGGTGA GGGGATGCTG ATTGGTGTGC TGGACGCGGG CTTCCTGAAT
GGCGATAAAG TGAGCTTTCT GAAACCGCTC TTCGATGAAA AACGCATTCT GGCAACCTAC
GACTTTATCA AAAAGGAGAC GAGTGTGTAC GAGGATGATT CGCATGGTCT TTCCTGTTTG
TCGGCCATTG CCGCCACCGC CGACCGCCAG TTGTATGGCA CCGCCTATAA AGCCTCGTTT
GTGTTGATTC GTACCGAAGA TGCAGCCAGC GAAAAGCAAA TCGAAGAAGC TAACTGGGTG
TTGGGAGCCG AATACGCCGA TAGTGTCGGG GTGGATGTGA TCAGTTCATC ATTGGGGTAC
ACCGAGTTCG ATGATCCGTC GACCAGCTAC ACTTACCAGA ATATGGACGG CAAAACAGCC
CTTTCGACCC GTGGGGCTCA AATTGCTGCC GAAACAGGTA TGATTGTGGT TGTGGCCGCT
GGCAACGAAG GAAGCAACGC CTGGCGTTAC CTGTCGGCTC CTTCCGACGC GGCATCTGTC
CTGGCTATTG GGGCCGTTAC CCAAGCTGGT GTACGGGCAT CGTTCAGTTC GTTTGGTCCG
TCGGCCGATG GGCGAATTAA ACCGGATCTG GCAGCTCGTG GACAGGGAAC CATCGTGGGT
AGTCCGGGCG GACAGATCGT TTCGGGAAAC GGTACCTCGT TTGCCACTCC GCTCGTTGCC
GGTCTGGCAG CCGGTTTCTG GCAAGCCCAT CCCCAGCTTA CGGCCGCTCA GGTAACCGAT
GCACTTCGCC AGTCGGGGAG TCAGTTCGGG AATCCCGACG CCCAGTTGGG GTACGGCATC
CCAAATTTTG AGCGGGCATC CGCACTCGCC GACGCCTATG GGCAGCTGCT AGTTTTTCCC
AATCCGTTCA GCGATGTGCA ACCGCTGGGC GTTCGATGGG GCGAAATCGA AGCTAACGTC
CCACTCGACG CTACGCTGAC AAATGCTGCC GGACGAGTGA TCTGGCAGAA CCGGTATACC
TCGGCCGGGC TGGCCGCCTT TACATTGCCC TACCTGAATT TATCGGCAGG TATGTACTTC
ATGACCCTGG TTGCGGGCGA CAAGAAACGG ACAGTAAAGC TGGTAAAGCA ATAG
 
Protein sequence
MAFGKSIAFK HMGRNKISYL VGVLLFCQLT GFGQSTRKFL VLLRDKANSP YSISRPEQFL 
SQRSILRRQK QNIGILERDL PVNPAYVSQL QQAGAKVWFT SRWLNAALVE ATDATIASVQ
SLPIVKGLEF GRSLANARVS AANQVSAPKK VTTINTLADA PLEYGNSQTQ ITQLGADIMH
QQGYHGEGML IGVLDAGFLN GDKVSFLKPL FDEKRILATY DFIKKETSVY EDDSHGLSCL
SAIAATADRQ LYGTAYKASF VLIRTEDAAS EKQIEEANWV LGAEYADSVG VDVISSSLGY
TEFDDPSTSY TYQNMDGKTA LSTRGAQIAA ETGMIVVVAA GNEGSNAWRY LSAPSDAASV
LAIGAVTQAG VRASFSSFGP SADGRIKPDL AARGQGTIVG SPGGQIVSGN GTSFATPLVA
GLAAGFWQAH PQLTAAQVTD ALRQSGSQFG NPDAQLGYGI PNFERASALA DAYGQLLVFP
NPFSDVQPLG VRWGEIEANV PLDATLTNAA GRVIWQNRYT SAGLAAFTLP YLNLSAGMYF
MTLVAGDKKR TVKLVKQ