| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_1623 |
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| Symbol | |
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| ID | 8725358 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | - |
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| Start bp | 1953280 |
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| End bp | 1955487 |
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| Gene Length | 2208 bp |
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| Protein Length | 735 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | |
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| Product | ABC transporter related protein |
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| Protein accession | YP_003386469 |
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| Protein GI | 284036539 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.068726 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.025744 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGCAAAAA AGTATCCCTT TTACCGTCAG TACGACCTGA TGGATTGTGG GCCTACGTGC
CTACGGATGA TTAGTAAGTT TCATGGCAAG TCGTTAGATG CCGCTTATCT TCGGGAAATA
GCCAATTTGG CCCGCGACGG TACCACTATG GGTGGGCTTG CCGATGCCGC CGAGCGAATT
GGGTTTAGTA CACTGGCGTT AAATGCTCAA TACGATACCC TGGCCGAGCA AATTCCGTTG
CCCTGTATTG CGCACTGGCG GCAACGGCAT TTTGTGGTGG TGTATGAAGC AACACCAACA
AAAGTAGTTG TCGCCGACCC CGGCCACGGC TTGCTGACGC ATACTAAACA GGAGTTTTTG
AAGGGATGGA TTCCTGAAAA AACTATTTCA GACGACTCAG AAGGGGTCTT GCTACTGTTT
GAGCCAACAC TCCGGTTTTA TGAGCAAGAG AATACTCCTA AAGCGAACAA GAAATCATTT
AGCGGATTTT TGTTACGCTA TTTTCGACCG TATAACCGAT ATGGCCTGCA ACTCTTTCTT
AGCCTATTAA CAATCAGCTT ACTGCAATTA GCCTTACCTT TTTTAACCCA GCAAATTGTC
GATACAGGGA TTAATACCCG CAATCTCAAT TTCATTTACC TGGTACTGAT TGCTCAGTTG
GTCTTATTCA TTTCCCAGAC CGGAGTCAAC GTACTGCGCA GTTGGATTTT GCTGCATGTG
ACAAGCCGGG TAAACCTGCG TATGCTCTCC GACTTCATGA TGAAGCTAAT GCGGCTACCT
ATAGCCTTTT TCGATTCGAA AGGAACTGGT GATATTTTAC AACGGATTCA GGATCACAAT
CGCATCCAGG CTTTTTTATC AGCCACTACG CTGGACGTAC TTTTTTCGGC TGTCTCCTTC
CTAATTTTCG GGTCGATTCT TTTCTATTTC AATGCCCAGC TATTTTTCAT TTTCCTCCTC
GGATCGGGCC TGTATATGGT CTGGGTCTTG TTGTTTTTAA AACAACGTGC CGAAATCGAT
TATCGGTATT TCGACCAGGC TGCCGGTAAC CAGAGCAGTG CGATACAGCT CATCAACGGA
ATGCAGGAAA TAAAACTCAA TGGGTCTGAA AAACGACGAC GCTGGGAGTG GGAAGCCATT
CAGGCCCGTT TATTTAAATT AAACATCCGT AGTATGGCTC TTTCTCAAAC GCAAAATGAG
GGTGGGCGTT TTCTCAACGA AGTCAAAAAT ATTCTAATCA GTTTTGTTGC CGCAAAATCA
GTAATTGATG GCCATATTAC TCTTGGCTCG ATGCTATCCG TTCAATACAT TGTTGGTCAG
ATGAATGTGC CCATCAACAA TTTTATTGCC TTCATTAGAA CGTATCAGGA TGCAAAATTA
AGTTTGGGCA GATTGACCGA AATTCATGAT AAAGACGACG AAGAGTCTAC GGTTAACACA
ATGATTTATG AACTACCAAC CGAGCGAACT ATTTCCTTCG ATAACGTAAG CTACAGATAC
GGTAGCAGTA GTTCTGAATT AGTATTGAAA AATATCAGTT TTACGGTTCC CGAAGGAAAA
GTTACGGCCA TTGTAGGGGC AAGTGGCAGT GGCAAAACAA CTTTATTAAA GCTACTGTTA
AAATTTTACG AACCGGTTCA AGGCCAAATT CATATTGGCA ATAGTAATTT AAAAAACATC
AGCTATGATT TTTGGCGTAG CCAGTGTGGA GTCGTTATGC AGGAAGGGTA TATTTTTTCG
GATTCAATTT CGCGAAATGT GAGTGAGTCA GACTCCAATG GGTTAATTGG CCGAAAAAAG
CTACGAGAAG CCGTAAGCAT TGCAAACATT GAAGAGTTTA TAGAAAGTCT GCCGAATGGG
TTTAACACAC GAATTGGCTC CAGCGGAACA GGGTTAAGCG GTGGGCAGAA GCAAAGGATA
TTGATCGCCC GAGCGGTTTA CAAAGATCCC GCATTCATTC TTTTTGATGA AGCAACCAGT
GCTTTGGACG CCAATAATGA ATCGGTTATC ATGAAGAACC TGGATAGCTT TTTCAAAAAT
AGAACAGTGA TTATTGTAGC TCACCGGCTG AGTACGGTAA AAGCAGCTGA TCAAATTATT
GTACTTGACA AAGGAGAGAT TGTTGAACGC GGGACTCACC TCGAATTAGT TAACCAAAAA
GGGAACTACT ACAGCTTAGT TAAAAATCAA TTAGAGCTTG GCAACTAA
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| Protein sequence | MAKKYPFYRQ YDLMDCGPTC LRMISKFHGK SLDAAYLREI ANLARDGTTM GGLADAAERI
GFSTLALNAQ YDTLAEQIPL PCIAHWRQRH FVVVYEATPT KVVVADPGHG LLTHTKQEFL
KGWIPEKTIS DDSEGVLLLF EPTLRFYEQE NTPKANKKSF SGFLLRYFRP YNRYGLQLFL
SLLTISLLQL ALPFLTQQIV DTGINTRNLN FIYLVLIAQL VLFISQTGVN VLRSWILLHV
TSRVNLRMLS DFMMKLMRLP IAFFDSKGTG DILQRIQDHN RIQAFLSATT LDVLFSAVSF
LIFGSILFYF NAQLFFIFLL GSGLYMVWVL LFLKQRAEID YRYFDQAAGN QSSAIQLING
MQEIKLNGSE KRRRWEWEAI QARLFKLNIR SMALSQTQNE GGRFLNEVKN ILISFVAAKS
VIDGHITLGS MLSVQYIVGQ MNVPINNFIA FIRTYQDAKL SLGRLTEIHD KDDEESTVNT
MIYELPTERT ISFDNVSYRY GSSSSELVLK NISFTVPEGK VTAIVGASGS GKTTLLKLLL
KFYEPVQGQI HIGNSNLKNI SYDFWRSQCG VVMQEGYIFS DSISRNVSES DSNGLIGRKK
LREAVSIANI EEFIESLPNG FNTRIGSSGT GLSGGQKQRI LIARAVYKDP AFILFDEATS
ALDANNESVI MKNLDSFFKN RTVIIVAHRL STVKAADQII VLDKGEIVER GTHLELVNQK
GNYYSLVKNQ LELGN
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